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16-0735-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1949554 [Map]; Strand: w
      • AT3G06410.1 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-0735-1 - 5-prime edge 
    GATACNATCG CGACCCTTCT TNAGCGGGGC GACCGTACCG CTCCATTGAT 
    AGACCCTAAT CTCTACNGAN GGAGACNAAT NCNTCAAAAG AGCACAAGAA 
    NGAAGNCTTT TTTTTTTTTT TTTTGGGNGT TNNGTGGNAN GNTNNANCCC 
    CNNNNNACAA AAAANGGGGN GNTNNNAAAA ANTTTGAANN GGGAAAAAAA 
    AAANTNNTNT TNNNTTTTTC CCCNGNNTNN NANNGNGCTG GNNNNNNTTT 
    TTTTTTTTNN TNCCNCGCGA GNNNAAAAAT TTTTTAAACN CCGTGGGGNA 
    NAAAANGTTT TTTNTTCNTN TNNCNNNNAN NNTTTANNNN AANACNNCCN 
    GGGGCGCNCG NTNGGGGGNN NNTNTNTTNT TTCCNCGGNG GGGGGGGGGA 
    GNGTNNGCNC CTTTTTTTTN CGGGGGGCNC CCNTTTNTNG GGGGGNNTCG 
    NNGGGNGGGG GGNNTTNNCC GNCGCGCCNC TCTCAAGTNG ANTGGNGCNC 
    CCGCCCNCNC CCCGCGNNAN NNTNNGTTNN TCNCNTTNCC GCNCCACGNN 
    NCCCGGCCCC NNTNAGAATN GCNCNGCNNT TTCGTCCCCC ANNNATTNTT 
    TTNTTNCGGT CNNGNCCCTN CNNCCCCCNT TNNATATGAC CCGGGGTNGN 
    TCGCNTTCNA GCTTNTCTGG TTNCCNTTCC TNTGTCGTCN GTGNACGCGN 
    GAGGNNNANG NNTTNGGCNT ANAGACNACA AAAANAANAA AAAAAAAAAA 
    NAG

AT3G06410.1

Model type
Protein coding
Short Description
Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description
Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 3128 Blast hits to 1576 proteins in 227 species: Archae - 0; Bacteria - 85; Metazoa - 789; Fungi - 248; Plants - 1012; Viruses - 7; Other Eukaryotes - 987 (source: NCBI BLink).
Link
InterPro Scan - TAIR