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16-0800-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23094615 [Map]; Strand: w
      • AT3G62430.1 - [+] show detail - Protein with RNI-like/FBD-like domains
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0800-1 - 5-prime edge 
    GAGTTGAGCT TAACAACTGG ATAGCTATCT CGGAGAGTAT CAAAGTATTT 
    AAAGTATTCA AGACTAGGAA TATCCAAACT GATAGGCTCA AAACTAGAGC 
    CATCATGAAC CCATTCTTTA CGCCGAATAG TAAGTCGCTT AAGGATCTGA 
    CTAGATACAG TGCGATACCA TTTCCAATCT TCACAGTTGT GGCCATCTAT 
    GACTAACTCC TCGAGCACAG GGCAAGCAGA AATAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23094544 [Map]; Strand: w
      • AT3G62430.1 - [+] show detail - Protein with RNI-like/FBD-like domains
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0800-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCCCTTGTT GAAGCTAAGC TAGAACTTCC TTCTCTTTAT ATTGGGGATA 
    CCTACAATGT TAGGAATCTG ATAAAGGGGT TGAAAAATGT TCAGATTCTG 
    CGCTTAGGAG CTGTTGACAC GATGCACGTA AGTGCTCTCC ACTGAGATNT 
    TANAANNCAA AATCTTTCTA TACATNAGAA TGTTTATTGA AGTTATGACN 
    TGACTAGTTT TTTTTTTTTT TTAAANTTNN NNCCNNCNNN TTNGGGGTTT 
    NNGGGNAACC NCCCCCNGNN TTNAAAACCC NNTTNNTTTT NNAANTAAAC 
    CCNNANANCC CTTTTNGGGG GNAAAANNNG GTTTTTTTTT TNAAAAANNN 
    CCAAANTNAA AAANCNNCCC CNTTGGGGGG NCCNAAANCC CCNAAANTTT 
    TTTGGNNNAA NNAAAAAATT NAANCCCCNA AAATTTTTAN TNNNAAAANT 
    CCNGGTTTTT TGGNGGGTTT NCNTTTNNAG GGGTTNGGGG NAAAAAANCN 
    TTTTTNNAAA ANCCTGGNNG GGGTTTTTTT NNTTTTGGCC CCCCCNTTTG 
    NAAACCCAAA AAAAACCGGG TNNGGGGGNA AAANTNAAAA AANNGNNCCN 
    NNNNNANTTT TTNTGGAAAA ATTNNNNGGN NNGGGGNNCN NGGNAAANNN 
    NNNNNNAAAA AAAAAAAANT TNNNNAAAAN NNNNNAANTT NNGGGGNNNN 
    NNNNANNNTT CNNA

AT3G62430.1

Model type
Protein coding
Short Description
Protein with RNI-like/FBD-like domains
Computational Description
Protein with RNI-like/FBD-like domains; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G54160.1); Has 1224 Blast hits to 1202 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1224; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR