1. Home
  2. Mutant Lines
  3. 16-0857-1

16-0857-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26418981 [Map]; Strand: w
      • AT5G66055.1 - [+] show detail - ankyrin repeat protein
        Distance: 0; Region: exon1 (CDS)
      • AT5G66055.2 - [+] show detail - ankyrin repeat protein
        Distance: 0; Region: exon1 (CDS)
      • AT5G66060.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: -500; Region: promoter
      • AT5G66060.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: -500; Region: promoter
    Flanking Genome Sequence: 16-0857-1 - 5-prime edge 
    CCTCCGGCAC GAGGTTCTCG GGCTCAATCT CGGATTCATC TAATCTCTTA 
    GCCCCGCCAC GCCGATTCTT CTTGCGCTCC TGCTTCGCAA CCTGAGTGAC 
    CTCCTTCTCC AGGTAAGGAT CTTCGAAGAC GCCGTCCTCG TAGACGAGAC 
    AGTCACCGAC AATGAAATCA TCGCCGGCAT CGGGGAGGAT CGACGTTTGA 
    GAAGAATAGG AAAGAGACCG TAATCGAGTG GGGAAAGCAA GGGAGTGAAG 
    AGAGGGAGAA AGACGAGACG GAGAGGTTCT GGGGAGAAGA AGAGAGATGG 
    TGTGTGGGGT GGAGAGTGAC TGCATTATCG GAATAATCTT GAATAACGGA 
    GCTTTCTCCT CTCCTCCTCG CCGGCCTCTG ATGTAGTATC CGACAATTTC 
    AATGGGCCTC ACTTTCTAAT GGGCCTTACT TAAACATATG GGCCTGACTT 
    CCCGTTCGTC CTTTGATTAG TAGTCAATCT ACCAGACACC ACGAGAAAGA 
    AAATAAAATA AACTCCATTG TTGCTGCTGC CCTGCTTCTT TCGAATCTCG 
    CTCGGCCGGA TCTCATCCTT GTTGCTAAAA TGATGGCGAG ACAGAGGAAT 
    CATCGTCCTT CAGCTCGTAA ATCCTCNCAT TCAACGCTTG TATTCGGCGT 
    ATTGATCATG TCTACTTTCG NGATTTTGAT TCTTCTCNCC TTTGGAATTA 
    CCANCCCG

AT5G66055.1

Model type
Protein coding
Short Description
ankyrin repeat protein
Curator Summary
A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Computational Description
ankyrin repeat protein (AKRP); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 83523 Blast hits to 28077 proteins in 1268 species: Archae - 145; Bacteria - 7202; Metazoa - 43238; Fungi - 6726; Plants - 3393; Viruses - 1185; Other Eukaryotes - 21634 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66055.2

Model type
Protein coding
Short Description
ankyrin repeat protein
Curator Summary
A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Computational Description
ankyrin repeat protein (AKRP); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66060.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2544 Blast hits to 2536 proteins in 339 species: Archae - 0; Bacteria - 388; Metazoa - 1050; Fungi - 75; Plants - 443; Viruses - 21; Other Eukaryotes - 567 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66060.2

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1).
Link
InterPro Scan - TAIR