1. Home
  2. Mutant Lines
  3. 16-0909-1

16-0909-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8348274 [Map]; Strand: w
      • AT1G23540.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 16-0909-1 - 5-prime edge
    GCGATCCGGA CTCTCTTAGA CCACTCTAAA ACTGGCAAAC CCTTTCCTAA 
    AGCGTAAAGC GAGTCAGTCT AACACGTAAA GCTAAAAAAA AGTCTTATCT
    ATAACGAAAA TGGTAACAAG TCACTCACCA TGCAAATGAT GCTCCAAGGT
    TTGATTAGAA ACATACTAGA TAGATAAGCA ATCTATGCTG GTCTGAAATG
    CAGTAACCAA CCAGAGAGAC CAAATGGCGA TGATGAACGC GGCTGATGAT
    CTCAACCTCT GCTTTGAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8348170 [Map]; Strand: w
      • AT1G23540.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 16-0909-1 - 3-prime edge
    CNGAGAGCTA TATCGATCAG GGNCNATNGG NNGGCNGATC TNANCGAACA 
    CTTNTACGTA NNTGCCTTCA CATTTCTCTT ATGTTGTGTC GCTTGTGGCN
    ATNCACCTTC GATATNNTTA AACNCAGGCC NNAATCNTAT CCGTNGNNTT
    ATNTTACAGG TCATCCGAAA ATCATTCACA GAGATATAAA GTCAGCAAAT
    ATTCTTCTAN ATGATGAATA TGAAGCTCAG GCAATAATGA AATCCTCCTT
    TTCGTTAAAT CCATCTTATG ACTGTAAAGT TTTTAGTTAA TGAGACTTGT
    TCTGTTTTTT GGATGTTTAG GTTGCTGATT TTGGACTTGC TACACTCAAT
    GATACAACAC AAACTCATGT TNCAACTCGG GTTATGGGAA CCTTNGGGTA
    AGCNAANATT CATCACAAAC TCTACTCCAC AACTGGACCT TATTGNTCCA
    ATGCCTGAGG GAAAGGTTGT TANNTATGGC TTCCAGGNNA CAAATNNNNT
    CAANANCNGA NTCNTNATGG NACNACCATG NGGGTCCCGN GANAGNANGC
    GNNCCATTAN TNANTNTGCN NNNNACGCGN AATTANNGNG NCAACNNNGC
    GACNACTCNN GCTANANNGN NCNNNTNCNN GCCCGGGTGC GGGGNGGCCN
    NNCNCCNANC GCACNNNTGC CNCGNNNNGN NCNTGNTGNT CNACCCNCTT
    ANGCCTGGCC GNGCNTCGCC GNTCCTCGCN TCNNTCTCGG NAGTNCACGT
    NATTGNNNNT NNACCNCCCN CNCNTNC

AT1G23540.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Curator Summary
Encodes a member of the PERK family of putative receptor kinases. Overexpression leads to morphological defects and reduced fertility and increased expression of MAX genes.
Computational Description
INFLORESCENCE GROWTH INHIBITOR 1 (IGI1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: developmental process; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, anther, root, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: root hair specific 10 (TAIR:AT1G70460.1); Has 385447 Blast hits to 227080 proteins in 6289 species: Archae - 678; Bacteria - 66210; Metazoa - 145576; Fungi - 56663; Plants - 56890; Viruses - 7200; Other Eukaryotes - 52230 (source: NCBI BLink).
Link
InterPro Scan - TAIR