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16-0918-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5067247 [Map]; Strand: w
      • AT2G12470.1 - [+] show detail - transposable element gene
        Distance: -115; Region: promoter
    Flanking Genome Sequence: 16-0918-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG GACGGAGTGG CTCTGATACC ATATTAGAGA
    AATAATCTTA ATGAATTAAT CTTCTCATTA ATCATAAAAT GATACAAAAG
    TGTTTATATA CATAAGACTA AACCAAAGTA AACCACTAAT ATAATTACAG
    TAAACCGGAT AAAAGAAACC GGATTACATA ATCTAAAACA GAATGCCCAC
    CCATTCTCTT TATTTAAATT GCTTAAATAA GAAGAGAGAC AGTTTAGGTT
    CAAAATTCGG TAAGCTATCC CAAATAGAAG CT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5067196 [Map]; Strand: w
      • AT2G12470.1 - [+] show detail - transposable element gene
        Distance: -64; Region: promoter
    Flanking Genome Sequence: 16-0918-1 - 3-prime edge
    GTAACAAACT TTCTCCGGTG ACTTGTACGG TGTGCGATCT TCTCTTCTCC 
    GGTCATCTCT CGATCGAATT

AT2G12470.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 5.1e-277 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR