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16-0929-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8843488 [Map]; Strand: c
      • AT1G25230.1 - [+] show detail - Calcineurin-like metallo-phosphoesterase superfamily protein
        Distance: -1171; Region: intergenic
      • AT1G25240.1 - [+] show detail - ENTH/VHS/GAT family protein
        Distance: -1743; Region: intergenic
    Flanking Genome Sequence: 16-0929-1 - 5-prime edge 
    GGGATAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC ATTTGACCTC AAAATATTAC GTTGTAGTAC 
    CAAAGTTTTA CTCGAGAAAT CAATTTTTAG CGATGCGTTC CACAATTATC 
    ATCATGATGT TTCTTTGTGT TTACCACCTA GTTTTTTTTT ATTAATGAGC 
    TAGTTAGAAN AATAAAATAA TGAAAATAAA TAACAAAATT TGTAATATAC 
    ACATGANAAA TTGTTGGATG TTAAAATTTA TATGGTTTTT GTAAAAACAA 
    AATTCTTCTT GGGGTTATAA TGTTATATTA TTATATTNGG AAACAATGAT 
    TGAACAATAT TATTGGATNT AACAGATCAG GCTATAAAGA TGTATATACA 
    TGATATGGNG ATGCAATTAT TTTGTTGTTT TGCTTTTGGT ANANAGTTTG 
    ATTCGGGTAN ACCANATATG AGTAGTTGGC ATTTCCGCAA AGTTGTTTTA 
    NANACATGAC AGCCAAACTT GATTGCGTAT GGGGCATAAT TNATCTTCTT 
    CTATCTCTCA ATTATCCGTT TTGGATAAAA AAAAGTTCAT TTTGATTCCA 
    CAACATNTAT CTACATACTC ACCATTCNAA TTAAAACACA CTTNTTTGCN 
    TTTAAAAAAT AAANTNANAA GCTNCCANCC NGGGCCGTNN ACCNCCNGNC 
    CCCTNTA

AT1G25230.1

Model type
Protein coding
Short Description
Calcineurin-like metallo-phosphoesterase superfamily protein
Computational Description
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 1153 Blast hits to 1147 proteins in 286 species: Archae - 1; Bacteria - 297; Metazoa - 336; Fungi - 8; Plants - 186; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25240.1

Model type
Protein coding
Short Description
ENTH/VHS/GAT family protein
Computational Description
ENTH/VHS/GAT family protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat, mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G68110.1); Has 471 Blast hits to 436 proteins in 54 species: Archae - 1; Bacteria - 2; Metazoa - 90; Fungi - 7; Plants - 370; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR