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16-0930-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7148322 [Map]; Strand: c
      • AT5G21050.1 - [+] show detail - LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING:...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0930-1 - 5-prime edge 
    NCTTNTGNGA CCTTNGGATT NATGGTAAAN GCTTGGATNT GACGAGATCT 
    GGAATGTTGA CCGGTTATTG CTNGACCGGC NCTGTGAGGT TGTTTCGTGC 
    GCCGTANAGA GCGAGTAAAA CGGCTTCNAA TCCGGCTTGN GGTNGACGGA 
    NAGGGACACG NAGAGAGGTN GAGACCNNCG ATTAANGGAN CNAATNGGAG 
    GACNATNAAN CTGAAACCGA TGGNNCCGCC GGATNGNAAN GTGTCNTANA 
    CCCCGCNGCA AANGTTGTNN TCTTCNGTCC TGAATTNGNN CANTGGANGA 
    NNGANGNNAT CNGCNGGNGG ANNCNNGCCT NTCNCNNCCA GGNGGATGGN 
    NACTCGTGGT NNGGATNNAN NNTGCAAANN GANGATTNGA GNTNCCNTGN 
    CNNGACATNG NGGANANAAA TAAATNTGNC GCNNNANGNA NNNNCNAGNN 
    ACNGNGTGCN NCGTGCGGCG NAATATNNCN TCGNNCCNGN NTTNCNCATN 
    NANACCANNN NANGACATCA NCNNCNNNCN NNGANATCNT ANATANNTNC 
    NTANANNCNN ANTGCACGNA AANCNANNNT ANTATNNATA TNGNCGGGNT 
    ACCANGNNNG TNCTGCNCNN NAAANANGTN NTAANNGAGN NNGNNTNNAN 
    NGNCANNANT NNNNTGTNAN NNCAGNTACN GCNTNTANAN NCGCGANNAT 
    CCCNCGCANN ATNGCCGCAG NNTNCCCCGN CGCCNTNTTN NCNNTCNNTT 
    CNCCCNNNCG CTNAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7148407 [Map]; Strand: c
      • AT5G21050.1 - [+] show detail - LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING:...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0930-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTC 
    AACGTGCCTC AACATCGCTG TGATCTCCTC CACGTTAGAT CCACACGGGA 
    CGGTTAGATC CACGCGCCGC GCGAGGATCG TCGGAGTCGC GTTGGAGCTT 
    TACTATAGCA AAATCTCGAA AATGCCACGC NGAATCTAAG CT

AT5G21050.1

Model type
Protein coding
Computational Description
LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64090.1); Has 206 Blast hits to 206 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR