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16-0958-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 331618 [Map]; Strand: w
      • AT5G01849.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -155; Region: promoter
      • AT5G01850.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -719; Region: promoter
    Flanking Genome Sequence: 16-0958-1 - 5-prime edge 
    CATGTACATA TATGATATAT GATTGGAAAT ATTTGAATAT GTGAAGAATC 
    CACTTCACAC ATGGCTACTG TTAGAGAAGA AAATATGTGA TTATAAAAAG 
    CCTACGAATC ATAGAGAAGC AAATAGAAAT AAGGTAGAAT CTCATTAAAT 
    AAGACTGAAA GAAGAAAATA TGGTAAACCA TACGTGCGTG TAGTAGGACC 
    CGAAAACAAA ATGTCTCATG TCTCATAAAC TCATTTGCCA AACTCCAAAA 
    TATAATTCCA CCACCATTGG GGAGCTCTCT CTCACCTGCC TAAACCGGAC 
    TCCGATCCGG ACATGTGGTC GTCTACATTA GACGTTCTTT TGAAGTAGTA 
    TAATTTTCTA CAATAATAGC TTGTTTTGTA GAAAAAATAA ATAAAAAGGT 
    TTTGATAAAA TCATATAAAT AAAACGTGCT AAAAAGAAAA AAGAGAAAAA 
    CGACNAGGGA ACAAGNAACT AGTAATTAAG TGTGGGACAA GAGAAAAAAA 
    AAGACNGAGN AAAATGCNTC NGTCNGATAA TNTTTGNTTT CNAAANGGNA 
    GGCAAGCCNC NANAAACCTA NTTAAATNGC CCAGCCACAA AGCCCCCNCT 
    TTATCCCGAN AGCCNAGCCC GGGCATTGCA TTTNNTNCGA GTTGGGACCN 
    TAATTAAAAA TGGTCCCAAG TTCGGNTTGA NTTTNAAACC NNGTNCCGTT 
    NAAATAAATT NAGATNCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 331502 [Map]; Strand: w
      • AT5G01849.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -271; Region: promoter
      • AT5G01850.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -835; Region: promoter
    Flanking Genome Sequence: 16-0958-1 - 3-prime edge 
    TGTACATGAC ATGAAGTTTT TAAATAGCAG TGAAGAAGAC AAAAAAAAAA 
    NGATTTAANA CGACANCTAA AATNTCNCTT AAAAAACNCG GNGTAATTNA 
    TTCTNCTNCG GTTAANGGNC ANCAGGCCCA ATNTCAAATT NGGATTNCAC 
    TTTCTTAAGN CANGGGNCNC CAAAGTTTNC NATNTCTCTN TNTTTCNAAT 
    CCAAANCANC NGANGTNGTN NCTNGTNGTN GTTNCTATNA AAAAAAAAAT 
    TTTTNNTTNN AAGNAANGTC CCACCNGCCT NANTNNNANG CCCTNGTTTG 
    GCCNTNTTTN CCGTAACCTA ATTTCCAANT TTCCAAAANA ACCNCCTTTA 
    NCANNCCANN TTTTAAAAAT NCGTTNNNNC TNANNNTTTT GGGTTNNAAA 
    AAATNAAAGN AANTTTTTTT ANCACCATTT TTTGGANNAA AATTTTTTTT 
    TTTTTTTTTT TTTAAAAAAA CNAAAANAAC CCCCCCCTTT TTTTTTNTTT 
    TTTTTTGGGA ACAAAATTTC CNAAAAAAAA NNCCCCCNNC CNCGGGGGTN 
    AAGNTTTTNC CCCNAAAANT TTTTTNCAAG NNTTTTTTNT TTGNTTCTNT 
    NAAAACTTNG GGGAAATTGG NNTTTTTTGG GCCNCTNGGN NCCCCCCCCG 
    GGGGNAAAAN NATTTTATTT CNCCCCGGGG GGGNAACCCG GNNNNNTTTA 
    A

AT5G01849.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01850.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G27560.1); Has 131148 Blast hits to 129643 proteins in 5072 species: Archae - 162; Bacteria - 15033; Metazoa - 49603; Fungi - 12189; Plants - 33321; Viruses - 522; Other Eukaryotes - 20318 (source: NCBI BLink).
Link
InterPro Scan - TAIR