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16-0967-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7428682 [Map]; Strand: c
      • AT1G21220.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 16-0967-1 - 3-prime edge 
    CCGAGAACGT TACATAGCTT CGAAGCTCTT CGCTTAACGA ACTCATCATC 
    CAAGATTTGA CTCTCGCGTT ACATGTTTCC CATGGGCGAT AGAGCGGTGA 
    GGAAGGTTCA GGTTTCGCGA TGGTTCCGTC GATGAAACCG ATTTTGCTCT 
    TGCTTTTGAA GGAAAATGAC AAAATCAATC TTCCACATGA AGTAGTTATC 
    TTCGGATTTG CTTAGTATAG CCATGGGAAG ATTCTCGTTG GATTGATAAT 
    TTGGATCGAG ATAATAGGGA GATTCTGGAT CGAGTGTTGG AGATTCCGCC 
    ATTGTTACTG TGACTTGCTC TGCTCTGAGC TCTCTCGTTA CTGTTTGAAT 
    TTAGGGTTTG CTTTTTATTC CTTTCAATTT TTATAAACAT AAATAGATGG 
    GCTTTAGATA TCTCCTTCTG AGCCCAAAGT TTTAGGACTT ATTAGATCTT 
    CCCGCCTCAA CTAATACTTG TGTGTTGCGT GGTATGTACG TAACTTCAAA 
    AAATGAAAGG GCTCATTTGC TTCAAACTTC ATATTGGATC

AT1G21220.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 3.9e-26 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR