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16-1055-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7611740 [Map]; Strand: w
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1055-1 - 5-prime edge 
    TTCGTGGTGA ACCCAGATGG TTCAGGTCTA CGTCAATTGC TTCCACAAAT 
    GGGATTTGGA ACAGTTTGGG ATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7611624 [Map]; Strand: w
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1055-1 - 3-prime edge 
    ACCACGAAAA CGCCTGTGAA AGAGACGAAC GCGAATCTGT CACCTTCCGG 
    CGAGATAGAC GGGAACGCAC CGTCGAATCT GAAGAGAGAG AGGTCGTTTG 
    AAGTTGTTTT GAGGCTTTGG AGGAGATTCC GAGGAGTTTT ACNGTCCAGT 
    TGCGTCACCT CTGCAGCTAT GGTATCCGAC TCGGGACGAG TCAGGGGAAA 
    GAAACGGGTT AAAGTGATGA CTCTTCGGCG AGACTAAACG AGTCAACTCG 
    ACGAACTCGT TCTTCTTTAA ATCGAAAAGC TCCACGTGGC GGATTTCTGA 
    TCCAGGCCTC CTTGTAGCCA CCGCGATGAA GTTGTTATTG TTTGGTGACG 
    TGGCGGGTGT GAAAGCGTGA AGACCCGGTG GTGTGACTCT TTGAATCGTA 
    ACCGATTTGG TGGTAACCGG TCCGGTTTTG GGTAAAATCG CTCGGTACAC 
    GCTGATCCAA CCGTCGTCGC TTTTCCGGTG GAAATACAGA GTCGAGTCAT 
    CGACCCATCT CGGCCACCCG CCTTGCTCGA CCACCTTGAC TCGCTGAGTT 
    CCATCCTGAG TCAGGAAAAC GTAGACGTCT GAACTAATCT CTTTCTCTAC 
    CATGCTCCAA GTCCAGCCTT TCTCTCCAAA CGAAGCCACG GCAGTCCACT 
    TCCCAGACGG AGACACAGCC GGAGAAAAGT CAGCGATACC CAGTGGTGTA 
    AGCCGCCGAG TCGACTTANT TCGTAACTCA GTCGAGTAAC AGCGGCCCAA 
    CTCG

AT1G21670.1

Model type
Protein coding
Computational Description
LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink).
Link
InterPro Scan - TAIR