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Mutant Lines
16-1056-1

16-1056-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 2; Position: 13079309 [Map]; Strand: w
- AT2G30695.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, prote...
  Distance: 0; Region: exon9 (CDS)
- AT2G30695.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, prote...
  Distance: 0; Region: exon8 (CDS)

CNTTNATAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATN 
TNCCCNNCNN NCNGTCANGC CNNCGANNCG CCTTGGCTGC CACTATAAAT 
TTCAGCAGTA CANCATTATA TAAACAACTA TGACACTAGC AAAAAATAAT 
AAATGGAAAG TTTTGTTAAA CCTTTGGATT CCTATCTTTG TCTATCAATA 
CTNGCTCTGC ACCCCTACAT AAGTAAGACA CNGTTCTTGT AATTATGGTC 
TACAAAGGAC AGTTTCAGGA TGTAGATACA ATCGGAAAAG CTGACAAAAC 
CTCCACAAAG TCTTNGCTTA TGTCTCCCTT CATCTTCGAT AGCAGAATTG 
ATTAATTTCT TTATCACCTG CTTATAGACT TTAGAATATC CAAGGATCTC 
TAACAAAACA TCTTTGGGTA TCTGCAAATA TAAGTAAAGG AGAACTTGAG 
CATACGCCAA ATAACAACTC AATGTAAGTG CTTAAGTGAG TTTGCCAGCA 
TATAATATCA CTGCAAGAAC TCTGAATCTG AGAGTATCAC TAAAGTGTAT 
CAAATGATCT TTTACAGATA AGTCCAATCT CGTCAAATAA AAACACATGC 
TCCATTGCCA AACCACTTGA TGGTTAAATT ATTTTACCAT AATGCTAAAA 
TAATGGATTC TCTAAAATAC ACTGAAGTAA AAACTTACAT TTGGGGTCTT 
TCCTGTAGTT CCAAAGTTGA TAAGCAGATG TAGAAGAGGA AAAGAAACGA 
AACAGCAATG GGAAAAACAT TAGAGAAGCA CCAAATGAAT

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 13053822 [Map]; Strand: w
  - AT2G30650.1 - [+] show detail - ATP-dependent caseinolytic (Clp) protease/crotonase family protein
    Distance: 0; Region: exon14 (CDS)
Flanking Genome Sequence: 16-1056-1 - 3-prime edge
```
AGTACTTTGA GAGAGTGGAG GATGAGGAGG GATGGGAGGA TCTTAAGTTT 
CCGCCAAGGA ACAACTTGCC TGCTTTAGCA ATCGCAGCAA AGCT
```

AT2G30650.1

Model type: Protein coding
Short Description: ATP-dependent caseinolytic (Clp) protease/crotonase family protein
Computational Description: ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: petal, leaf whorl, sepal, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 32067 Blast hits to 32054 proteins in 2254 species: Archae - 421; Bacteria - 21939; Metazoa - 1258; Fungi - 833; Plants - 620; Viruses - 0; Other Eukaryotes - 6996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G30695.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G30695.2

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR