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Mutant Lines
16-1116-1

16-1116-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 9806805 [Map]; Strand: w
- AT1G28110.2 - [+] show detail - serine carboxypeptidase-like 45
  Distance: 0; Region: exon1 (CDS)
- AT1G28110.1 - [+] show detail - serine carboxypeptidase-like 45
  Distance: 0; Region: exon1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TGAGCTTTAC CCTCATTCTC TTCCACTCTC TCACGGTCTC CTCTAGTGTT 
CTGTCCCACT CAGATCGAGT CACCCGTTTA CCCGGTCAAC CCCGGGTCGG 
ATTTCAGCAA TACTCCGGTT ATGTCACTGT CGACGACAAG AAACAGAGAG 
CTCTGTTTTA CTACTTCGCC GAGGCAGAAA CCAATCCATC CTCTAAACCT 
CTCGTCCTCT GGCTCAATGG AGGTTCGTTT CAAATCTTCA CTCACTCTCA 
ACTACCAAAT TACATTATAG TAGATTAGAA AAAATTAAAT GTGAAAATGT 
GGATAAATGC AGGACCTGGA TGTTCATCTT TGGGCGTTGG GGCATTCTCA 
GAAAACGGAC CATTTAGACC AAAAGGACCA ATCTTGGTCA AGAATCAGCA 
TAGCTGGAAC CAAGGTAATT ACAATTCAAG ACTCTTTTTT CAACATTTCA 
AAAAACTTTA TTAAGTCTTG ATTTTTAATT TTGTTTGGTG GTTGCAGAGG 
CTAATATGTT GTATCTAGAG ACACCTGTTG GAGTTGGATT CTCTTATTCA 
ACTCAAAGCT CCCATTATGA GGGTGTTAAT GATAAGATCA CTGGTTAATC 
TTCTTAAACC CTTCATTAAG TATCTTCTTT TTCTTTAATT CTCAATTCTT 
GATTAAAGAA AGCAAAAACA AAACCCTTCA GAGAAACTGN GTTTTGCTGA 
ATCTATTGAT TTANACTTTG CATAAAGGAA CCCAGACGTT TGTGTCTTTT 
TCCCTTTTTC AAAATTCAAC

AT1G28110.1

Model type: Protein coding
Short Description: serine carboxypeptidase-like 45
Computational Description: serine carboxypeptidase-like 45 (SCPL45); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 46 (TAIR:AT2G33530.1); Has 3718 Blast hits to 3657 proteins in 439 species: Archae - 0; Bacteria - 354; Metazoa - 639; Fungi - 854; Plants - 1450; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G28110.2

Model type: Protein coding
Short Description: serine carboxypeptidase-like 45
Computational Description: serine carboxypeptidase-like 45 (SCPL45); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 46 (TAIR:AT2G33530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR