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16-1250-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9162710 [Map]; Strand: w
      • AT1G26515.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1250-1 - 5-prime edge 
    TCGGTANTAN AGGGGTGAAG ACAGTGTGAA TNTNNGACCC GGGANCCGAT 
    TAANGTACAA GGCNTGCNGG CGACCGGAAA NATGTGATGA NACTTGGACT 
    GCGGATAGTT GCTGCACATG ACTTGGATAG TGTGAGAAAC CTANCTACAG 
    ATTTCAAAGG CAACCTCCTA AATATCTCGA TCTCTAGGTC CAGAGGCAGT 
    TGATCAAACT TGTTTTTCTC TTTTGACTTT TCTTGATTGT TCTCGGTTTT 
    GGTCTTTTTG CTGCGTGTCT TCATGATCAA TCGCTCTTGT TTCGAAACCC 
    TAAAAAAGGC TCTCCGTCTA GGCGTCTACT CTTTGCTTTG CTCTTTTCTA 
    GCAACTAGTA AAACTATATA TATATAACCA ATGGGCTTGT TGAGTCAGAT 
    TTTACAAGCC CAAGATAAAG TCTCATCAGA AGCCCACTTA AGTAAGTAGA 
    GATTTTGTGT CGAGAACATC AATATATATA TGAAATTAAT CCACAAATCA 
    GCTAAATCTT GGTGACAGNN NCTTTTCCTC TTTTACATCT TTTGTTCAAC 
    AAAGCTACCA GCCCCGGGCC GGNNAAAACN CNNGNNCTNT ANNNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9162638 [Map]; Strand: w
      • AT1G26515.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1250-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTACTGGTAG ACCACAAGTT ATCCTTCTTC TCATCATCGT CTTCCTCATC 
    ATCATCAACG TCTTTTCTAT CGCGTTTGAC ATGTCCGTCG TCCCCATACC 
    CTCGTCACAT GGAGTACTAT TGTCATTATG TAAATGGATT GATAAGCT

AT1G26515.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT1G26510.1).
Link
InterPro Scan - TAIR