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16-1506-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 262980 [Map]; Strand: w
      • AT1G01710.1 - [+] show detail - Acyl-CoA thioesterase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 16-1506-1 - 5-prime edge 
    ATCATCCAAC CGGCGATTTC TTCCGACTAG CCGAATCCGC CATGAACACC 
    GAGTCAGGTA AGCCTATAAC GTGAGATTGA GGAATGACGT AGTGAGATTT 
    TCGGCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 262864 [Map]; Strand: w
      • AT1G01710.1 - [+] show detail - Acyl-CoA thioesterase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-1506-1 - 3-prime edge 
    TGGATGATGA TGATTAGGTG TGAGAAAATG TGGTTTCCTC CCACCTGGCA 
    AGGTAAATCA ATTGTATCAA CTACCAGCTC CGGTTTATGG AAGAATACGT 
    GGACTCGGTT CGATTTTTAT TTCTCTCACG TGTTATAAAT AAAATAATAA 
    TAATTAGTAT TAATAAATGA AGAAATATAC AAATAATATT GGTGTGATGT 
    AATTTAATTC TTGAGATGAA ACAAAAAGCA ATAAACAAAT CCTACAACCT 
    CAAGGCCCAT TAATGGCTTT AAGGCCTTAA AATAAATCCG AACTAAGTAA 
    ATTTCTAAAT GGCCCATGAG AAGAGACGAT AATAACAGAA TCTCAGTCAG 
    CTGTTATTTT AATTCGTTTC TAGTCTAATG TTTCTATTTG AATCAGTATT 
    TATTTTTCTT TTCGTTTAAT TTGCTTGTTT AAAACCAATG GTTACTATAT 
    GCAAGTTATA GTAACCACTC CGGACGGGTT TTCGTCTTGT TCGATTATCA 
    CTCAGTGGTT AATTAAATTG TTACCAACTC CTGAAAGCTG TTATTTTTCG 
    TTTCTAGTCT ATGTTTCAAT TTGAATCAGT ATTAATTTTC TCCAAATCAT 
    GGATGCTTTC TCGATCGATT GGGTCTCACT GTCACGATGG ATTTTCCTCC 
    TACTTAATCT TAAAGCATAT GTACATTTGG AAACAGATAT TCTCTGTANC 
    TATGTGTTCT CGCGTAACAC GCTAGGTACC TTTGGGGTTT ATGATTTCNT 
    ATCTTCAT

AT1G01710.1

Model type
Protein coding
Short Description
Acyl-CoA thioesterase family protein
Computational Description
Acyl-CoA thioesterase family protein; FUNCTIONS IN: cyclic nucleotide binding, acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT4G00520.2); Has 3628 Blast hits to 3595 proteins in 999 species: Archae - 0; Bacteria - 1940; Metazoa - 444; Fungi - 348; Plants - 71; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink).
Link
InterPro Scan - TAIR