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Mutant Lines
16-1528-1

16-1528-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 2240391 [Map]; Strand: w
- AT1G07280.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron2 (CDS)
- AT1G07280.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron2 (CDS)
- AT1G07280.3 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron2 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTA ATACTTGACA GTGGAGTATG TGGTGTAATT 
TTGAAGCTTG AGTCTTTAGA CCACTGTTAC ATTATTTCTT CATCCACCAA 
TAGTGTTGTT AGGTAACAAT TCTCTAAAAT GGGTAAAACA GTGTTTTAGA 
TATTTTGGTG ATCAGTCTCT TGATAATATT TTGACATTTT AGCTAAGCGG 
TTCCATTTTA GACAGTTCCT CATTTGATAC ATCTGTCACA TTCTATAAAC 
CAAAACCCAA TTCACTTACG TTTTCTCACT TACCCTTTTG GCCTTATTCA 
ATCCATATCT TATCTCTACT CTATGTCTAT ATCTAACGTG GCTTCTTTTG 
GTTTGTTTGG TGAAAACAGA GCGGAAAAGT ATTTCAAGAG AGCAGCAAAA 
GCAGAGCCAG CGGACGCAGA GGCATTGAAC AAATATGCGA CGTTTCTGTG 
GAGAGCGAGA AACGATATTT GGAGAGCGGA GGAAACCTAC TTAGAAGCGA 
TCTCCGCTGA TCCAACAAAC TCAGTCTACT CCGCAAACTA CGCACATTTC 
CTCTGGAACA CCGGTGGTGA TGAAACGTGT TTTCCTCTCG ACGCTCCATC 
GCAACAGAAC AACACCACAT GAATAAAGAG TCACAACAAT TTGTGTATGT 
ACAGTGTGTT TTTTGCCTAT ACAAAACTCA TGTCATGTGG CAAACTTTTT 
TTTTGTTTTT GNGAACCAAA GACTTTANTT TATT

3 prime edge [+] show sequence

Chromosome: 1; Position: 2240398 [Map]; Strand: w
- AT1G07280.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron2 (CDS)
- AT1G07280.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron2 (CDS)
- AT1G07280.3 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron2 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
AAGTCAAGTA TCATCAACCA AGCTTATTTT TTTCTTTGTT GGGAACCCAC 
CCCCAAAAAA GACTCTGGCT AAAAGACAAA CTCTTTGGGA AAGAGAACTA 
TCAATCCCTA TAGTGAGTGA CAACATTTTT AAATTATTCC CTATTTTATT 
CTGAAAATGG AAGATGTAGA TATTCACTTA CTAGTTGGCT TCTTTCTCTT 
AAGGGGTAAA GAGAACTGGT TCACTCAATT TAAAGCCTAT CCGATTGGTT 
CTTATGGTGA TTTGATTATG ACAATTTCTA GCTTAAAATA TCTCTATGGC 
TCCCTAATTT GCAATAAAAT ATCTACCATT CCACGGCTAC TTCTGACAGT 
TAGTATCAAC TTGCAAGACT CCAACCTAAA CACCAAACCG AATCTAAAAC 
TCCATAATCT AACTTAGTAT AATAAAAGAA CAAAATCAAA GATAACATGA 
TTAGTAGTAA ATTATAATAT AATGGTCAGA TGTTAATTAC CTGTCGTAGT 
CATGAATGAT AAGGTAGAGA AACTGTGCGT AATTAGCAAG AAGGAGAACG 
TTTCCAGGCT CCTGAGACAA TCCCGTTTGG TAAAGAAGCT CTGTCTTGAA 
GTAATCCATG GATTCTTCTG CTTCTAATCG AGCTTCCACC GGAGAAACCA 
TCCCCTTCAT CGTCTCGTGA TCCAACGTTT CCATTTTCGC AGTTTCCTCC 
AATATCAAAT TCCACAGTCT GATCTCTTCT TN

AT1G07280.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29670.1); Has 604 Blast hits to 369 proteins in 73 species: Archae - 4; Bacteria - 161; Metazoa - 2; Fungi - 2; Plants - 383; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G07280.2

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G07280.3

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR