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16-1618-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2549088 [Map]; Strand: w
      • AT1G08135.1 - [+] show detail - cation/H+ exchanger 6B
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 16-1618-1 - 3-prime edge 
    GTCTCATGCC GATGAGAGTA GCTTGAGGAT TCATAGCCAA ATGGTAGACA 
    TGAACCGTCA TGAAGACCAA AGGCCTGGAG ATAAGTCAAC CATCATTGAC 
    TGGACGGTGG GAGATGGCAC AGAGACATCC AAAATTTTGC ACTCCGTGTC 
    TTACGACTAT GATCTATTCA TAGTCGGTCG AAGAAGTGGG GTTGGTACTA 
    CAGTCACCAG AGGACTCGGG GATTGGATGG AATT

AT1G08135.1

Model type
Protein coding
Short Description
cation/H+ exchanger 6B
Computational Description
cation/H+ exchanger 6B (CHX6B); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: Cation/hydrogen exchanger family protein (TAIR:AT2G28170.1); Has 1422 Blast hits to 1406 proteins in 439 species: Archae - 64; Bacteria - 709; Metazoa - 0; Fungi - 111; Plants - 510; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
Link
InterPro Scan - TAIR