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16-1724-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11185326 [Map]; Strand: c
      • AT5G29550.1 - [+] show detail - transposable element gene
        Distance: -812; Region: promoter
    Flanking Genome Sequence: 16-1724-1 - 5-prime edge 
    GTNAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGT GGGTGCATTA GTGCTGGTAT GATCGCATCC 
    GTAAGTATAT GCAATGCAAT CGTATATATT CTTTTTTGAA GACTTGATGA 
    ACCATCCCNN GCNGGTCCCA CCCNCTNNGT ANGGATACCC CATCTAGTCT 
    TAACGAGCTT TGATGCATGA AAAAATTCGA AAACAATGCT TGAACAAGTA 
    ATTTTGGGTC CGTAATATAG CCCAAATCAC GAAAATGCCC GAAAAAGTAC 
    TTAAAGGTCA AAATTTGGGG TCGACAAAAA GTCAATGGAA AAGTTCCATT 
    GTCCTGCTTA TTTCGTCGGA GGGCTATCTT TGGGCTTTCC GAGAAGGTAT 
    CACATGCTGA GTTTGGCCTC ACGGTCTAAA AGTTATGGAG TCATAAAGTT 
    TTAACAAAAA AAAAAAGGGT NAANCTTAAA AANGGGNTNC NNCCNNNGGN 
    NTNCCGGGGG GGGCCCCCNT CTNANTTTTN TTTTNNCCAA ANCCCCTTAA 
    ANNGGGGATT TTTNNGGGNA NAANANNCCG GGNCNNNNAA CNACCCGNNN 
    CCNNAAA

AT5G29550.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 7.4e-126 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR