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16-2139-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9914731 [Map]; Strand: c
      • AT1G28310.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: -894; Region: promoter
    Flanking Genome Sequence: 16-2139-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTG 
    TTTTGCTATC TAATGACTAT ACAATAGTTT CTTATTTTTA CTTTCTAGTT 
    TTGTAACGTT AATAGTGTAA ATTGTACAAT TGATTGAAAC ATAAATATCA 
    AAAATTGTTA ATAGAAGTAG CATGCCTTAA TTTTATCCGT CACTTGTTCT 
    TTCACATCTA CTCCAATCTG GATTGTACNT GTTGTCTTTG CGTATCTGAT 
    GGTCTCCATT GTAATATCTC AACTTGTCAT CGCCTGTTTG CCGGATTGTA 
    TTGCCCTTAT GCTTCAGAAA TCAGGGACAT ATATATTGGG ATGCTCAATC 
    AGTGAAACAA CACAAAATTT TAGAAACCTT CATATTTTGG TGAAGATTAC 
    GCAATCATCT TCTCCTTATT CCGGTTTTCA TATATATCCT CTTCCTCCTG 
    GATC

AT1G28310.1

Model type
Protein coding
Short Description
Dof-type zinc finger DNA-binding family protein
Computational Description
Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1299 Blast hits to 1242 proteins in 95 species: Archae - 0; Bacteria - 24; Metazoa - 66; Fungi - 20; Plants - 1091; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).
Link
InterPro Scan - TAIR