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16-2167-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24145103 [Map]; Strand: c
      • AT5G59960.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-2167-1 - 5-prime edge 
    GTGGTAGTTC CTTTTTGGAT CAGTGGTTTT TGAAATGGAG AAAGTTTCGT 
    CGCCGTCTTC CTCTTTTTCA CGGAGGTCTG CTTATCTTGA AGCTCTTACA 
    CAAGAGATTA AGAAGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24145219 [Map]; Strand: c
      • AT5G59960.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-2167-1 - 3-prime edge 
    ACTACCACAT GCGATCAACA GCGTCGATCT ATTGTCGCTA GTATGAGAAA 
    TCGAGAGAAT GATAATGATT GCTTCTTCGT TACGAATTAT TTTATTCAAT 
    CAATCAATGA ATGGGGTCTC CTCTGGATTT AAAAATTAGT CGTAATTAGG 
    CNGTGAACTT TCTTTTCTCT TTTGCTACTG TGAACTCCGA TAAAGACACG 
    AGAGGAAAAA ACGAAGATAT TGTTTGTTTC AAAACGACGT CGTTGCATTC 
    TGGATCAGAG AGATGACGTG TTGGTTGGCT GAAGACACGT GTACCTATTC 
    AGGCCCCTCT TTATTTTTCT TTTAATCTTT TTTTTTTTNT AAAAAAAATC 
    ANCGNCGTNG GGGTAAAATA NTTNCGGAAN GAAATNGATN AANGNCGTTT 
    NGTNTNTTTT NAAAATTNGT TNTNCANTNC AACANTTTNT TCNTNTCNCC 
    TTNTTTTAAA TNNGTTTCCA ATTNTAAAAA TGGGANNATT NGATNCNTCA 
    AATNCAAAAA NCCCTTAAAA TNCCNCTATN NCCTTTTTAA AAGGGNTNAA 
    AACCTCTTTN TCCCNTNCCN CNCGGGGCAA ATNGAAACCT TTTTAAATTC 
    ACCCCAAANT NNNGGGAANC TAAANTTTNC CCCCTANTGA GTAANGTGGG 
    TAAAAGCTAC CANCCNGGGC CGNNNCCCCN NNNCCNTT

AT5G59960.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR