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16-2186-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 51099 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -2749; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 7606; Region: intergenic
    2. Chromosome: 2; Position: 54080 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -5730; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 4625; Region: intergenic
    Flanking Genome Sequence: 16-2186-1 - 5-prime edge 
    CTGCATATCA ATTTGAAGCC CCGAGGCTCA GCTTTCTAGA AAGACCAACC 
    TACACCTTAA CGTCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 51215 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -2865; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 7490; Region: intergenic
    2. Chromosome: 2; Position: 54196 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -5846; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 4509; Region: intergenic
    Flanking Genome Sequence: 16-2186-1 - 3-prime edge 
    ATATGCAGAT CGCCATGAAA ATTCTTTTGG ATTGCTAGAA ATTTGCTTTC 
    TAATTTGGTT GATCGTGCAG TGAGGATCTG CGTTTCGCTG GTTGCATCTG 
    TTGCAAAGAA AGAGTCATAA CCTTCAGTGT AAATTTCTGA TTGAGGCGAG 
    ATTGGCTTCT TTTGAAAGCT AATTTTCGGG GCATTCCGTG GATAGGTTAC 
    ACGCCACGCA GTTCGTCGGA ATCTTCCTGG AAATTGATTT CAAAGTCGAC 
    TGGTTTTGTA ACTTTTGACC AGTGTTTCGT CTTGCTGTAT CTGCTGGAGA 
    GAAGCGCATG TAACTTTCGG CACATAGCTT CGATTGGAAC AATATGGACT 
    ATATGGAGAG CTGTCTGTCT GGGCAATCTG TGGATATGTT TCCTGTCTCT 
    TGGTTCGCGG GTCGTACAAT GTCGGAAAAT TGCTCACGAA GTTGGTCGTT 
    TGCAAGTGGT GTCAGTCTGA ATTGTCTTGG AAAAACGATC ATAACTCTCA 
    AACCATAACC TCAAATCGTG ATCCGCTTTT TTCTGTGGCT TCGTGTGACT 
    GTTGCTGATT ATTCCAGAAA ATATCGTAAT TTTCCGAGTT GTTTTGTTGC 
    TCCATTGGCG ATCAGAATT

AT2G01034.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR

AT2G01037.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 5.0e-229 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR