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16-2386-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23218740 [Map]; Strand: w
      • AT5G57330.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 16-2386-1 - 3-prime edge 
    TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTNTTTTTN TTTTTTTTTT 
    TTTTTNTTAA ATTGTAAACG GTAGGAGTNT TTTACCGACC GTTACCGACC 
    GTTTTCATCC NTAATNAACA CGCAGNTCCG GTTCTTCCNT TANCACAAAN 
    TGCATANNCA AATNCAGAAC TCANTAACAC GTANNAGCNA AAACCCAANG 
    ATCTNAGAGA TTTGCAAATC GTAATCATAC TNCANAAATC GATCTNCAAT 
    CANATTGATC TAANNCTCAG ATCAACTAGA GATAGAGCAC GACGCCGCGT 
    GAAAATNNAC CTCTGCAGAG CGGCCGCGAG ACTCGCGGAG AACGATCTTA 
    TCAAGGCCAT TGATGCCTTT AGCAAGCTCA AAATGANGAC GCTNCGTCGC 
    CATGGAGAGT ACCAAAAGTA NAAAAAACAA AAACAGGATC NAAATCCTGA 
    GATTNTCCGT ATATATNGTN GTTTCTAATC TTCTTCTCTC ACTCACTTTT 
    TTTCCTTTTT TTCTTCACTG NTGCTTNACG CACAATTGGA AAAAGGCTGN 
    TGCTCCCCTT TTTTTTTTTN NNCCTCNTGT NCNCGACGCN TNTNTNNTCT 
    TCANCCCNTC CTTTGNNCTC TANTCANAAT TTGGTTTNNN GCNNCACANT 
    NTNNGNTTNG NNNCAGTNNA NGCGCNGNAT NCCTNGGNAG NNNGTNTTAA 
    NCNNAANACT ANNNTTTNAT NANNNNNTTG CCNGNAAGNN ANTNTGNTTG 
    GGNNNTGGNG AGNGNNCNNG TCNNNNCNCN CTGAGTTGNG NNCCTNCCCC 
    NNCCNCNAGA GNNGNNNGTN NCGNCNGNAA NCAGAGGNNA NTNCACNGAT 
    NCAGANNNNN NCATATNNAA CNNGTGNCTG GNTNGNANNA AGANAANTAA 
    CTNATCNAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23218758 [Map]; Strand: w
      • AT5G57330.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 16-2386-1 - 5-prime edge 
    ANGAANGCGN AAAACCTCTG TNTANTGTAN TCCTNTNANT CTGNTGATGC 
    NCTCTCAGAG GTGAATCAGT NTTTTTTGAN TAATTGNTCA TCTAATAANN 
    TATTAATTGT GANCTNTCTG CNGNTTNATT GATCTCCATC TNNGNCTAGT 
    TCGTGTATCA NCCCGNCCGG TTGTTTAATC CGAGTGGGCG AACNAATGCA 
    NGTTTACTTG TATGGAAGTC ATGTAACTCC TTGGAAGANT GAGAACGGAN 
    AGGAGCTTAC TTCNCCTCAN TANCAAGGNA CTCCTNCATA TCGTATACCA 
    TCCTNCCNCT TNATCACTNA AACGNGACNT TTGGTTAATG ATTAATGTTT 
    NCANCTTCTT TAGAGATGAT ATGGNCTNTT NTGAAGNNCA AATNNGATGG 
    CNNAACATGN NTGGACCTCA NGTCATCCNT CCGGTTGANT GTNNTTTCTN 
    TTNANGNTAA TNTTCACNNC NTACCAATGA TNGCCTCCCN NNNNCCTNNC 
    NGACGGATTN TGTGAAANNC TNTGCCTACN TGTTGCNCCT TTCTCNNCCN 
    CANNACNNCN NCCGNNNANA GGNTNTTCNC CNCNATTTTT TTGCNCNGTT 
    NTCCATTTAN NANTTNGNTN NNACNNCNNC NCATNNTTNT CCTTNGANNG 
    NGNNNNANTN NNCNCCNANT CGAACNNNGC NNCCCTNAGG TNNNNNTNTA 
    NAANNTNTGN NTTTNNCNTA ANTNCTNATN TNTGTCNCTT TGNGANNNNG 
    TNAANANCCG GNTN

AT5G57330.1

Model type
Protein coding
Short Description
Galactose mutarotase-like superfamily protein
Computational Description
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink).
Link
InterPro Scan - TAIR