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16-2483-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8666602 [Map]; Strand: c
      • AT1G24460.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (CDS)
      • AT1G24460.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 16-2483-1 - 5-prime edge 
    GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTC CACAGTAGTG TTCCCATCTT CACCTGTCAA 
    ATCATTCTCA CCAGTCAACA GCTTAAACTG CTCCTGAAGC CCTGCAAGTT 
    CATTCTCCCA ATCCCCCTTC TCAATCTATA TGCAGAAAAC AAACAAAAGA 
    AAAGATCTTT CAATAAATTT TCGAGGAAAC TCAACTAAAA ATTTAGACTT 
    TAGAAAGAAT CATAAAAAAA ATAACAGACA TTGAAATGAG TTCCAAGGTC 
    ATCATTATCA TCGTCATCTG TGGTAAGAGC TTCCTTGCTA GGTGTATCAA 
    AATTCAACTC TTCAGGAGCA TCAACAAACA TATCTTCCTT ACTATCAACG 
    AAAGCTGTTC CCTGCAAAAT ACCAATCCCC ACAATTTCAG CATACGAAAC 
    ACAAACCACA TAAACGATTC AGAGCCATGG TGAAATAGAA ATCTCACCTG 
    GTCAGGATCA AACTCTTCTT CTTCTTGCCC ATTANACTCG TCATCATTCT 
    CAATTCCATC AGCTATAGAA TCCTGCGGAA GATCATCATT CTCGTGCATT 
    ATCTAAATAC GATCCCAACC CTTTTTTCCC CCAACAGATC TACCACGAAT 
    T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8666609 [Map]; Strand: c
      • AT1G24460.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (CDS)
      • AT1G24460.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 16-2483-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTTGTCAGTC GCTTCTCGAA GTTCTTAAAA ACTGCCAAGG AAGAGCGGAT 
    TCAGCATGAG GTTGCACTCA AGGAGCTTCA CGGGGTTATT AGTGGGAGGG 
    ACGATGAGAT TGCTGATCTC ACCACAAAAA TCTCTGAGCT TTCTTCGTCG 
    CAGCCGGTTT CCGAAATGGG TGATCAGGCA CAGAACTTGG AGCACCTTGA 
    GGCTGCAACG GATAGGATTA TGGTTTCTCT TAGTAATGTA TTTGGGGAAG 
    GGGAGTTGCA GTATGGTTCT TCTATCTCTG AAAAGCT

AT1G24460.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa - 70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other Eukaryotes - 33775 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24460.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1).
Link
InterPro Scan - TAIR