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16-2554-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30214756 [Map]; Strand: w
      • AT1G80370.1 - [+] show detail - Cyclin A2;4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 16-2554-1 - 5-prime edge 
    GATAAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCCCTC GTGCTCTTGC CTCTGCTCTG CGTGCTTCTT 
    CTAAGCTGAT AACATCTTCT GAAGTGGCTG CTACAACACA GAACCAGGGA 
    CGGGTTCTTA GAGCAAAGAG TAAAAGAACA GCCTTGGATG AGAAGAAAGC 
    CAATGCACCT AAGAAGCGAG CTGTTCTTAA GGATATCACT AATGTTACCT 
    GCGAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30214700 [Map]; Strand: w
      • AT1G80370.1 - [+] show detail - Cyclin A2;4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 16-2554-1 - 3-prime edge 
    GTTACAGGGC GACCATGGAT TGGTATAGAG TTTCCAGAAA CAGCATTCTC 
    CTTCCCCATG ATTGAAACCC TTTGACACGA TCCAACCCTT TTCTAACGTT 
    TGGGACTTAG CACCACATTA ACTCTCGATC TGTGAATTTG AAGTCAAGAG 
    AAATCGAAGA TCAATGGCAT GAAGATTAAA CAAAACAGAG AGATATATAT 
    TTATCTATGC AGAGTCCAAT GCATATAAGA TGTTTGGAGA AATTGTTTAT 
    TCTAAACGAG GATTGTTTAT CTGATCATTC ATGACTAGAC AAATAATTGC 
    AACACGTACT TGTTGTTTAA GTTCGTCGAA TCAAGTTCCA AAGTTTCAAG 
    TCAGATTCAA GTTGAAAGAA CAAGTCTTTG TGAATTACAA TTTACTTGTT 
    GACAAAAACT TGAAAACTGT AATGCAGAAA ACCCTCAACG CTCGAAAGAA 
    AAAGTCTTAG CAATTTTAGC AAAGACGGGA GCGACTTGCG CAGAATTTGG 
    AGATAATTAA ATTTGAAGAA AAAATTAGTA AAGTTTCTAA ATTTCTTTCA 
    TGGGTTTTTA TATAAAAATG TTTATCCATA AGAAATAGGA ACAAGAAAAG 
    GAACGACTAG ATCAAATTTC TTCTGAGGAT ACCGAAAAGA CCCATGATTT 
    AAAGCTGCAA GATCTCCCAA AAAACCTATN GANCCNTCNT TNNNAAAAAN 
    NNNNNNANNN NCCNTTTTTT TTNTNCNAAA AAAANCNNNG

AT1G80370.1

Model type
Protein coding
Short Description
Cyclin A2;4
Computational Description
Cyclin A2;4 (CYCA2;4); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A2;3 (TAIR:AT1G15570.1); Has 4103 Blast hits to 4099 proteins in 369 species: Archae - 0; Bacteria - 2; Metazoa - 1911; Fungi - 542; Plants - 1008; Viruses - 34; Other Eukaryotes - 606 (source: NCBI BLink).
Link
InterPro Scan - TAIR