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16-2562-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
flower (PO:0009046)
  • present in greater numbers in organism (PATO:0000470)
    (Branching::inflorescene)
fruit (PO:0009001)
  • abnormal (PATO:0000460)
    (Fruits (Siliques)::abnormal shape)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 17328836 [Map]; Strand: w
      • AT5G43160.1 - [+] show detail - Family of unknown function (DUF566)
        Distance: -439; Region: promoter
    Flanking Genome Sequence: 16-2562-1 - 5-prime edge 
    CTTGTTCGCG TCGTTTCAGG CGGATTCGTT TACTCCAGGA ACATTAGAGA 
    GGAGGAAGAC GACTTCTTCG GCAACAATAT CTAAGAGTGG TGGAGGTAAA 
    CAAGAGAAAT TGAAACTCTC TGATCAATGG CCTAGGTCTC TGCAACCTAG 
    TTGTTTAAGT AGTAGAAGTG TAGATTTCAC TGATACTAGG AAGAAATTGA 
    TCGGATCTGG CAATGGTGTA GCTAGAGCTC TGCAGGATTC CATGGTTAGT 
    AATAGACCGG TTTCGCGTGA GCGGATAACG AGTGTTGATT TGGAGACAGA 
    GAGTGTTTCT TCTGGAAGCT CTAATGGAAG AGGGAAAATG TTACCAGCTC 
    GTGGCAATGT GGTTAAGGCG AGAGTTTCGC AGGATCGGTT AGAGCCTAGC 
    TCACATGGAC TGAGGAAGAT ATCTGNGGAT AGTTCTGTAT TGTCCCCANA 
    GGAAGCCAAT TGTTTNCAAA AAGTGAGCAN ATTCGACCTG CTTCACCTAC 
    AAATTTGGTA TGAATTGCNA GCTTTTGTNA AGGTCCCNAG AGGGAACTTA 
    CCATTTGNTA NANGTTTAAG CCCNTTCNAG TAAANGTTTG CNNCCTTCCA 
    NNANGGGTTA NGNCCTTNAG ANTAGANGGA ANTCCCTAAN AGTGAGNAAG 
    CTTNACTTGA NNAAAAANCA CTCCNCNNAT TCNCCCATTT TNNTNGGGGA 
    TGGNAAANAN AAATANNAAN AATTAAAGGG GGNANCTANA NCANANNT

AT5G43160.1

Model type
Protein coding
Short Description
Family of unknown function (DUF566)
Computational Description
Family of unknown function (DUF566) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT3G19570.2); Has 205 Blast hits to 204 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 201; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR