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16-2640-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21767866 [Map]; Strand: w
      • AT3G58865.1 - [+] show detail - transposable element gene
        Distance: 1043; Region: intergenic
      • AT3G58877.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: 322; Region: intergenic
    Flanking Genome Sequence: 16-2640-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA CAACTAAACT TCTAAAGTTC ACGTAACTGT 
    TTTCAACGAG GCAAGCAAAG TAACACCAGA AGAAAATTAT GGGGTTTTCT 
    GCACTAGTCT GGTTTAGTTG GACTGGGTTT TCAAATCCAG TAGATCAAAC 
    CGAGCCCAAA TCAAATCAAA AAGCACTAAT AATACTCGTT GTTTTAGTGT 
    GCTGATAAAG TTTCTTTCTT TTGTTTGAGA GTTGAGACTG GGATC

AT3G58865.1

Model type
Transposable element gene
Short Description
transposable element gene
Curator Summary
Member of Sadhu non-coding retrotransposon family
Link
InterPro Scan - TAIR

AT3G58877.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR