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Mutant Lines
16-2786-1

16-2786-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 7604701 [Map]; Strand: w
  - AT1G21650.3 - [+] show detail - Preprotein translocase SecA family protein
    Distance: -472; Region: promoter
  - AT1G21651.1 - [+] show detail - zinc ion binding
    Distance: -486; Region: promoter
  - AT1G21660.1 - [+] show detail - Chaperone DnaJ-domain superfamily protein
    Distance: -998; Region: promoter
Flanking Genome Sequence: 16-2786-1 - 5-prime edge
```
GCCCTGGCTC ACTAGAATAG GGTGGATGTG TGCGATAACT TAAAGTATAT 
GCTCACTTAA AAAATTTACA TGAGAAAAAA GCT
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 7604622 [Map]; Strand: w
  - AT1G21650.3 - [+] show detail - Preprotein translocase SecA family protein
    Distance: -393; Region: promoter
  - AT1G21651.1 - [+] show detail - zinc ion binding
    Distance: -407; Region: promoter
Flanking Genome Sequence: 16-2786-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCTTGTG 
GATATCATAG ATGGACAAGA GAGAATCTTC CTAATGCAAG ACTTTATTAA 
TGCATGTTGC TAGGGCATTG ATAAAGTCTT GGATTTGTAA CATCATTCTT 
TTCCAAGACT TCGACGAATT
```

AT1G21650.3

Model type: Protein coding
Short Description: Preprotein translocase SecA family protein
Curator Summary: Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.
Computational Description: Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, zinc ion binding, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein transport by the Sec complex, protein import; LOCATED IN: internal side of plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), SecA, preprotein translocase (InterPro:IPR022491), WD40 repeat (InterPro:IPR001680), SecA motor DEAD (InterPro:IPR014018), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), SecA Wing/Scaffold (InterPro:IPR011116), WD40-repeat-containing domain (InterPro:IPR017986), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), SecA conserved site (InterPro:IPR020937), WD40 repeat, subgroup (InterPro:IPR019781), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G21651.1).
Link: InterPro Scan - TAIR

AT1G21651.1

Model type: Protein coding
Short Description: zinc ion binding
Computational Description: zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21660.1

Model type: Protein coding
Short Description: Chaperone DnaJ-domain superfamily protein
Computational Description: Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1); Has 3482 Blast hits to 1316 proteins in 282 species: Archae - 0; Bacteria - 662; Metazoa - 522; Fungi - 399; Plants - 281; Viruses - 8; Other Eukaryotes - 1610 (source: NCBI BLink).
Link: InterPro Scan - TAIR