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16-2831-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13580460 [Map]; Strand: c
      • AT4G27052.1 - [+] show detail
        Distance: 1150; Region: intergenic
      • AT4G27060.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 941; Region: intergenic
    Flanking Genome Sequence: 16-2831-1 - 5-prime edge 
    CATGTAGGAG CTGGGTGTTT TTCTGTAAAG ACCCTCCCAA AAATAATTAC 
    CCTACAATGG GTGAGACTTC ATTGTACTGG AAAAAAAAAG AAATCCCATT 
    TGATAAGGAT TGATACATAT GAAGTTTTTC ATGCCATATA TTCCCTCATT 
    GCCAGTGTAA TCTCAAAACC TCGAGGGAAA CAGGGTGATT CANAGCTTAT 
    CTATACTCCC ACATGGGTGT GTATTTGTTC TGTTTGACTC TTAATGCGAC 
    CAAATCAACT TTTTGAATAT ATGACTTTGG CAAAAACAAA TTTTTAAACT 
    CCAACCCGTT TGTGAAATAA ATAATAGAAA TGATGAAATT ACAGAGGTTG 
    TGATAAACAA CGGTTTAGTC TCATANATGA GTTANAAACT AGTGATTAGT 
    AGTCACTAGT TGAANAATTT TTTATCTTTC TTTTATTGTT ACTCAAACTA 
    GNGCTCCATA GTTGGCAACT GCTTTCATTG TCAAGAAAAA AAGTAGACCT 
    CATTTAAAAG TTTTCATCAA GGTCATTCTA CAAGAGTCCT ACTACTAAAA 
    ANATCCAATT ATCGAGTCCC TGGCGTGTGT TTGGCGATTA TGACTTTGAT 
    GAAAGGGTGT GAANAGGTAA CTCATCTCAT ATTNGNATAG CTATTTTTTG 
    CTGGNGCANA ACAACACTGC ANAATTCAAC ACTT

AT4G27052.1

Model type
Pseudogene
Curator Summary
unknown pseudogene
Link
InterPro Scan - TAIR

AT4G27060.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Curator Summary
Encodes a novel, plant-specific microtubule-associated protein that regulates the orientation of cortical microtubules and the direction of organ growth. The protein plays a role in control of microtubule dependent anisotropic cell elongation. spr2 mutant rosette leaves, cauline leaves, roots, petioles and petals curl in an anticlockwise direction.
Computational Description
TORTIFOLIA 1 (TOR1); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G50890.1); Has 232 Blast hits to 225 proteins in 36 species: Archae - 2; Bacteria - 8; Metazoa - 6; Fungi - 6; Plants - 191; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR