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16-2882-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 51401 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -3051; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 7304; Region: intergenic
    2. Chromosome: 2; Position: 54382 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -6032; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 4323; Region: intergenic
    Flanking Genome Sequence: 16-2882-1 - 3-prime edge 
    CGTGGATAGG TTACACGCCA CGCAGTTCGT CGGAATCTTC CTGGAAATTG 
    ATTTCAAAGT CGACTGGTTT TGTAACTTTT GACCAGTGTT TCGTCTTGCT 
    GTATCTGCTG GAGAGAAGCG CATGTAACTT TCGGCACATA GCTTCGATTG 
    GAACAATATG GACTATATGG AGAGCTGTCT GTCTGGGCAA TCTGTGGATA 
    TGTTTCCTGT CTCTTGGTTC GCGGGTCGTA CAATGTCGGA AAATTGCTCA 
    CGAAGTTGGT CGTTTGCAAG TGGTGTCAGT CTGAATTGTC TTGGAAAAAC 
    GATCATAACT CTCAAACCAT AACCTCAAAT CGTGATCCGC TTTTTTCTGT 
    GGCTTCGTGT GACTGTTGCT GATTATTCCA GAAAATATCG TAATTTTCCG 
    AGTTGTTTTG TTGCTCCATT GGCGATCAGA ATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 51285 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -2935; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 7420; Region: intergenic
    2. Chromosome: 2; Position: 54266 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -5916; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 4439; Region: intergenic
    Flanking Genome Sequence: 16-2882-1 - 5-prime edge 
    TATCCACGGA ATGCCCCGAA AATTAGCTTT CAAAAGAAGC CAATCTCGCC 
    TCAATCAGAA ATTTACACTG AAGGTTATGA CTCTTTCTTT GCAACAGATG 
    CAACCAGCGA AACGCAGATC CTCACTGCAC GATCAACCAA ATTAGAAAGC 
    AAATTTCTAG CAATCCAAAA GAATTTTCAT GGCGATCTGC ATATCAATTT 
    GAAGCCCCGA GGCTCAGCTT TCTAGAAAGA CCAACCTACA CCTTAACGTC 
    GAATT

AT2G01034.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR

AT2G01037.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 5.0e-229 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR