1. Home
  2. Mutant Lines
  3. 16-3024-1

16-3024-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19685753 [Map]; Strand: c
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 0; Region: exon1 (CDS)
      • AT2G48140.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -656; Region: promoter
      • AT2G48140.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -656; Region: promoter
    Flanking Genome Sequence: 16-3024-1 - 3-prime edge 
    GCTGCAAGGC CTGTGTGCGG TTAATGTTAA GGCCGATGTT TGGGATCGGA 
    CTGTTGACGG CTGAGCAGAT GCACTGCGGC GAAGATTTGA TGACAGAGTC 
    GAGCCGAGAA CAGCAAGGCT GTGAGGGAGT GGTTGAGTTT CCGGTGATGT 
    AGCTGAGGCA CGGAGAGAGA GTGGTCAGTG TGCTCACGCA TGAACTGCTC 
    GGCTGTGCTT TTGTTACGCT CCATAGAGCC GCCACAAGGG CTACAAATGT 
    GATTGCGTAG CTTCTTCTAT ACCCCATAAT TTGAGTTATT ATTGTTCAAC 
    TTTGGTGTTT TTGCTTTGGT TTAATTATAG GAGGAACTGA CCAGAAAATG 
    TCAAAGAGGC ANGTCTGGTT GGATGACCTA CTTTTCATGG TTTATATGGC 
    CTTTAATTTA TCAAACATAT CTATTGTTTC TAGATGCATC CCAATGTATA 
    CAACGCCACG TANACATGAN CCANTNTACT TTTTTCNACA ACTAATTAAA 
    AGATTGGAAT TNCTTNAGGN TACAAAGTTT GCTAAGGNGT TATACCAAAN 
    CTNAGCNTAT TTGTNTNCTT NTTNATATAG GGATNNTCNT TTTTTNAATT 
    NATGGAAANT NANNTAAAAN ATTNGNTCTN NTTGNNNAAA ANNNTGATAN 
    AAANGGNTTT TAGTTTGNAA GTTNGTTATA ANCTCTAANT NCANCNNTTG 
    TATGANTATA NNNNAACTGA ANGANNNGTT TNNNGANNAA GCGGNTGGGN 
    CN

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G48140.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
embryo sac development arrest 4 (EDA4); CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2); Has 541 Blast hits to 526 proteins in 56 species: Archae - 0; Bacteria - 35; Metazoa - 27; Fungi - 2; Plants - 459; Viruses - 2; Other Eukaryotes - 16 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G48140.2

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2).
Link
InterPro Scan - TAIR