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51-1241-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3354269 [Map]; Strand: w
      • AT3G10710.1 - [+] show detail - root hair specific 12
        Distance: 32; Region: intergenic
      • AT3G10720.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily
        Distance: 178; Region: intergenic
    Flanking Genome Sequence: 51-1241-1 - 5-prime edge 
    GCTNCCGGCN ACGAAANTGC CNTTCAGGTC CGGTCTCTGA TTNTGTCTTN 
    TCCGTTAANC AAATNCCCGN TTCAAATCTC TTNTCTTTTN GGATCTTTGT 
    AATTTATAAA TATATATNTT TTCATTATGT GAGANTTTTC AGTGTTACTC

AT3G10710.1

Model type
Protein coding
Short Description
root hair specific 12
Computational Description
root hair specific 12 (RHS12); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: root hair, flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04960.1); Has 2830 Blast hits to 2766 proteins in 319 species: Archae - 6; Bacteria - 575; Metazoa - 1; Fungi - 191; Plants - 2032; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10720.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04970.1); Has 2403 Blast hits to 2363 proteins in 309 species: Archae - 6; Bacteria - 557; Metazoa - 1; Fungi - 195; Plants - 1619; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR