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51-2127-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 218319 [Map]; Strand: w
      • AT5G01560.1 - [+] show detail - lectin receptor kinase a4.3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 51-2127-3 - 5-prime edge 
    ATCCGACGAN ATGTATCCGA NGAGTTTCGA TCCTANATCT GTTCTNGAAG 
    AATCNGAATA TCCCCAATTG TCGTGAATCT CAGGAACATC TTCGTCTCTG 
    TTCNGGTACN NGAGCACCAT TCTCATCAGC GGCCGAGATT CCGGTTTGTG 
    GTGACAACAG ANCNTNNCGA CNGCGAGAGC TAGCCTTGCC TCTCCTTCGT 
    CGTAACCAGA TCCGAGTCTC GGGTCGATCG CACTGAGGAT CTCACCGCTC 
    GCTTGTAGCT CCATAACCCA GTCGGCTATA AAGAAGGTCC CAGAGTCCGT 
    CGGTTTCCTC CCGGAGACGA TCTCTAACAG CAAAACGCCN AACGCGAAAA 
    CGTCGGAAGC TGATGAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 218204 [Map]; Strand: w
      • AT5G01560.1 - [+] show detail - lectin receptor kinase a4.3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 51-2127-3 - 3-prime edge 
    ACGTCGGATA GGGCTTCGAG CTCACACTCA CACACATCTT CGTCTCTCAC 
    CAGAATTTCT TCAANTTCTT TAATCGGTGG TAGATAAGAT TCGATTGACA 
    CATTCGAAGC TCGCATTAAC TCTTTTTTTT CNCACTNAAC TATAATTCAA 
    GTTTTGGAAC TGTGTTTAAA AATTGGGCTC NGNNCNTTGG GTTCTTTGTC 
    TCGTGTCCAA CAATTAGTTT AAAGCCCAGC CATTTGAAAT CGGACCGGAT 
    TGACAATCAA CAACTATGTA AAAACATGGT TTAGTTTTAA AAATCGGATA 
    GGGTTGAGCC ACGTATTTCA AATCTCACGC GACCACATGA CGTGATCTTC 
    TATAGTTCCA ATACTACATC TTTAAGGGA

AT5G01560.1

Model type
Protein coding
Short Description
lectin receptor kinase a4.3
Curator Summary
Encodes LecRKA4.3, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.
Computational Description
lectin receptor kinase a4.3 (LECRKA4.3); FUNCTIONS IN: kinase activity; INVOLVED IN: abscisic acid mediated signaling pathway, seed germination; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.1 (TAIR:AT5G01550.1); Has 124782 Blast hits to 123109 proteins in 4852 species: Archae - 131; Bacteria - 14218; Metazoa - 45637; Fungi - 10709; Plants - 35284; Viruses - 441; Other Eukaryotes - 18362 (source: NCBI BLink).
Link
InterPro Scan - TAIR