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51-2562-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1283122 [Map]; Strand: c
      • AT5G04500.1 - [+] show detail - glycosyltransferase family protein 47
        Distance: -346; Region: promoter
    Flanking Genome Sequence: 51-2562-2 - 5-prime edge 
    AACTCCTTCA CCGCAATTTT TTGGATACAT GCGAACTACA AAAAAAANTA 
    ANTACTACAA ATTAATAANT ACATTGGATA CTATCAAATA CNCATTTAAT 
    TTAGGGGACG TACNTTTTCT AANTCTTCAA ATTAAGGTTT TTTTGTTCAA 
    AAAATTCAAA TTAAANTTGG GCATAAAATA TATAGGTCGT GTGATCTGTT 
    TTTGTATCCG ATCTAAAAAT AAAATGGTAA ATGTTGATNA TCTATTTATA 
    TCA

AT5G04500.1

Model type
Protein coding
Short Description
glycosyltransferase family protein 47
Curator Summary
a member of the Glycosyltransferase Family 64 (according to CAZy Database)
Computational Description
glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).
Link
InterPro Scan - TAIR