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51-2672-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22177502 [Map]; Strand: c
      • AT3G60040.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 51-2672-1 - 5-prime edge 
    NCCCTNAANT NACACNATAT GTAGTCCAAC CCTTAAGAGA CTATCAGTTG 
    ATTACCATTG TCCTGATGAT GTTGANAGTG CTAGTCATAT GTCATNTGAC 
    CTCCCAAAAC TTGTCTACCT TGAGTATTCT CACTGCGCCT TGGGTGAGTA 
    TTGGCAAATT AATCTGGAGT CCCTTGTCGA AGCTAAGCTG GACCTTGGTC 
    TGGAAAGAAA GGTCCTAAGG ATGGATGTAA CGGATCTCAT TATAGGGATA 
    AGAAACGTCC AGACCCTGCA TCTTTCTCCT GATTC

AT3G60040.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Pentatricopeptide repeat (InterPro:IPR002885), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G06630.2); Has 42185 Blast hits to 11085 proteins in 246 species: Archae - 5; Bacteria - 27; Metazoa - 105; Fungi - 161; Plants - 41065; Viruses - 0; Other Eukaryotes - 822 (source: NCBI BLink).
Link
InterPro Scan - TAIR