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51-2875-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1640325 [Map]; Strand: c
      • AT5G05550.2 - [+] show detail - sequence-specific DNA binding transcription factors
        Distance: 0; Region: exon1 (CDS)
      • AT5G05550.1 - [+] show detail - sequence-specific DNA binding transcription factors
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 51-2875-2 - 5-prime edge 
    ACTGGAAAGA CGTCGCCGAC GCCGTTAACT CTAGACACGG TGATAACAGC 
    CGTAAGAAGA CCGACTTACA GTGTAAGAAC CGGGTCGATA CTTTGAAGAA 
    GAAGTACAAA ACAGAGAAAG CTAAACTCTC GCCGTCGACT TGGCGTTTCT 
    ATAACCGCCT CGATGTTCTA ATCGGTCCCG TTGTGAAGAA ATCGGCTGGC 
    GGAGTTGTCA AATCAGCGCC TTTTAAGAAT CATCTGAATC CAACTGGATC 
    GAACTCTACT GGAAGCTCTC TTGAAGATGA TGATGAGGAT GATGATGAGG 
    TTGGTGATT

AT5G05550.1

Model type
Protein coding
Short Description
sequence-specific DNA binding transcription factors
Computational Description
sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G05550.2

Model type
Protein coding
Short Description
sequence-specific DNA binding transcription factors
Computational Description
sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 359 Blast hits to 349 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR