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Mutant Lines
52-0016-2

52-0016-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 13063555 [Map]; Strand: w
- AT4G25610.1 - [+] show detail - C2H2-like zinc finger protein
  Distance: 0; Region: intron1 (5UTR)
- AT4G25610.2 - [+] show detail - C2H2-like zinc finger protein
  Distance: 0; Region: intron1 (5UTR)

CTGGTACGTG ATCGGACTAA CCATTCTCTT CTCATGAACA CACACTAAAT 
CGATTTGAAT TCATTCCTTC GTCTATACAT CACTGGTATT TGATTAGATT 
TCAAACCGCG AATACTATGA TTTCAATTCC GATTTTTCTC TGTTAGGTGG 
CTTAGTCATG GAGGAAATTA GGCATCTGTC TGTGTTAGTG ATTTTGACGC 
TATTTGAATC GAATACTGTT GATTTATATA GTTGCTTAGG GGAAGAATCG 
GTTCAGTATA TAGGTGCTTT GTTTATAGGA ATTTGTGTTT TGTGAATGTA 
TGTTGCAGTC GAATTCAATG GAGCTTGTGA AACAAGATGG GAATGATTCT 
CTCGATATGC TTATCANACG TGCGGTTGGA AAGGATCCGT TTCTTTCCTT 
CCCTAGACCT GAAAATACTC CTGTCCAGCT TTTTCAACTT CTCCATACCT 
TANAACGTCC AGGTAATATC TCATTGTCTC TCATCTT

3 prime edge [+] show sequence

Chromosome: 4; Position: 13063439 [Map]; Strand: w
- AT4G25610.1 - [+] show detail - C2H2-like zinc finger protein
  Distance: 0; Region: exon1 (5UTR)
- AT4G25610.2 - [+] show detail - C2H2-like zinc finger protein
  Distance: 0; Region: exon1 (5UTR)

CGTACCAGTN AAAANANAAC CANNACCCGT TCNGNCGGAN ANTAGGAGGA 
ANAAAAAAAT CGANANCGAT CCTTTTGGGG NTTCAAAGGA CCTTGGGACG 
GAAAAAAGTC CCCGAAAAAN TCAAAAAAAG TGNTGGGNCC CAAAAAAGGA 
NAANANANAA AANTGANANA AANTTTCGGA AANAGGAGGA GGAGGCAAAA 
AANCTNTGGA AAAAAANTTT TAAAGGCCTA TTCCGGGCAA NCAAAACANC 
CCTTGNGGCT CAANTCNCAA AAAANTCCAC CAANTTTTTG ATCAGTAAAT 
TTNTTTTTTT GTTTTAAAAA TANCTAAAAA ANAAAAANCT TTTTTTTTTT 
TTTTNNNAAC CNTTTTTTTT TTTTTTTTTN ANCTNNTAAA ATTTTAAAAN 
AACCTNTTTT TTTTNAAAAA ANTTTTNGGG NTANNCTTCC AAAATTTTTN 
TTTTTTNANC ATTTNTTTNA NTNNCCACCC NGGNCCGNNA NCCNCCCNNG 
NCCNTTTAA

AT4G25610.1

Model type: Protein coding
Short Description: C2H2-like zinc finger protein
Computational Description: C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); Has 1178 Blast hits to 1100 proteins in 218 species: Archae - 0; Bacteria - 148; Metazoa - 375; Fungi - 111; Plants - 98; Viruses - 2; Other Eukaryotes - 444 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G25610.2

Model type: Protein coding
Short Description: C2H2-like zinc finger protein
Computational Description: C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
Link: InterPro Scan - TAIR