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52-0122-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1736605 [Map]; Strand: c
      • AT3G05820.1 - [+] show detail - invertase H
        Distance: -848; Region: promoter
      • AT3G05830.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -72; Region: promoter
      • AT3G05830.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -75; Region: promoter
    Flanking Genome Sequence: 52-0122-1 - 5-prime edge 
    GGTAGTTGAC CATTAATACA GAGAAAATTA AATGAAGAGT CTTTCACAAT 
    TCAAATCTAT ATAATAATAA TCAAAACAAT GATCGTGACT TTACATGAGC 
    TATGACTTGA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1736721 [Map]; Strand: c
      • AT3G05820.1 - [+] show detail - invertase H
        Distance: -964; Region: promoter
      • AT3G05830.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (5UTR)
      • AT3G05830.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 52-0122-1 - 3-prime edge 
    CAACTACCAT TGTTCACATG CACCCGCAAA AAAAAAAACN AATTTTTTTT 
    TTTTTTTNTT NTCCTNATNT TNAAAGTTTT GAAATTNGGG ATNGCCTCCN 
    TGCAAAANCT GAATTACCCN AATNNGGATG TNTTNTTNTG AAAAAACNAC 
    GGGGGNTN

AT3G05820.1

Model type
Protein coding
Short Description
invertase H
Curator Summary
Encodes a putative plastid-targeted alkaline/neutral invertase.
Computational Description
invertase H (INVH); FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 687 Blast hits to 684 proteins in 100 species: Archae - 0; Bacteria - 137; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G05830.1

Model type
Protein coding
Curator Summary
Encodes alpha-helical IF (intermediate filament)-like protein.
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26770.1); Has 58119 Blast hits to 29878 proteins in 2086 species: Archae - 743; Bacteria - 6396; Metazoa - 31988; Fungi - 4358; Plants - 2396; Viruses - 181; Other Eukaryotes - 12057 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G05830.2

Model type
Protein coding
Curator Summary
Encodes alpha-helical IF (intermediate filament)-like protein.
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26770.1).
Link
InterPro Scan - TAIR