1. Home
  2. Mutant Lines
  3. 52-0131-1

52-0131-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3646962 [Map]; Strand: c
      • AT5G11420.1 - [+] show detail - Protein of unknown function, DUF642
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 52-0131-1 - 5-prime edge 
    AAAAACNAAC AAAATCGGTT ATACGATAAC GGTCGGTACG GGATTTTCCC 
    ATCCTACTTT GAGGAGCTTA ACATCATCGA TCACGGGCCC ACACAGTGAT 
    GAGAAATCAT CGCTTCTCAT CGAGTAAAAT GTGCTGTAAA ACATAACTCT 
    TGTGCGGGTC GAAACCGCCA CAAACCGTAG AGAAGCGCGT TTGAACCCTC 
    CTTTGCCTCG AGACTCATAA GGTACCTTTA GAGTGTCTTT TCCCGCAAAT 
    GCCTCCACCA CCATCGATCC TTGGCAAGCA TTGTTAGCAT CTCCAACCGC 
    AAACGAAAGC ACGTAAGTTT TTCCCACAAC GGTCCTAGCT ACCTGAGCGA 
    TTGCGCTTTC TTTGCCTGCC ACTAGCTCCA CGGCTCGACG GCCTTGTGGG 
    ACCGAGAAAT GCTCGACATC AACGTATTTG ATGGCTTTGA GTGATTCGAC 
    CATCCACGCG GGTAAAGGAG AGTGGTCATC TTCTATAAAG GGAGGAACCA 
    GAACGCCGGT TGTTGCGTTT GGGAGTACGT AGGGACCTTC TTCAAATCCT 
    CCGTTCTTCA ATATATTCTC TGTTTTATTA TATAATAGCA AAATCATATC 
    AATTAATTTA TTGTTCTGAA TCTTGGCTAA CACATGTCAC GTCATGTAAC 
    CGATCCATTA AAATATGTTC TAACACCAAA ATGACTATAC TTATAAGTGG 
    CCACATAAAT CAAATCCAAC CAGGCCAATT TTTTGAAAAC CATAATGGAA 
    ATAGAAATAC TTTACAGGTC TACCAAATAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3646974 [Map]; Strand: c
      • AT5G11420.1 - [+] show detail - Protein of unknown function, DUF642
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 52-0131-1 - 3-prime edge 
    NTTAAAACGG TNGAGGTATT TTACNGACCG TTACCGACCG TTTTCATCCC 
    TCAGTGCTCG TAAGCCGTAA GATGGCCATT GTTTTATTTC TAAGGTTCTT 
    CGTATAAGCC AGTGTGGTTT TTTATATAAA TATGATTTTC TTAATCTCTA 
    ATGCTTTTGA AATGAGATGA GTAATACTGA AAGGGTGTTT GTGGTGTAGG 
    GTTTTATATA AGGCAAAAAG GTCTTGCTTA TATATATTTT CTTGTATGAG 
    AAGGCTAAAG AAATGTTGTC TGTTTTTACT AAATTGGGTT CTTTCAAGGA 
    GATCGGGTGA TTGTGAGAAT AAAAATGTAA TACAGATATA TATGGTAGAG 
    AGGAATGAGG ATAATAATTT AACTTTAGCT TCTTGTGTAC TACCAATCCG 
    TGTTAGGATC AAGCT

AT5G11420.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF642
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR