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Mutant Lines
52-0168-1

52-0168-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 4; Position: 18415 [Map]; Strand: c
- AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: exon2 (CDS)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCATG GTCAGCCGCT GACTCCCGCC GCCGCTCCAC 
TCCGGTGCCA CTCTTGCTCG TTTTCCACCG GCCATGGTAC GACCATCGCT 
ACATGACCCC ACCCGGGTGG AGCCAACGCC ACCAGGCTTG CTCTGCTGCT 
CGTGTACTAG GTTGGAGCAA GGGACAAGCG CGTCCATTGC CATCGCGGCC 
CTGGAGGAGC GATGATGGAA CCACGGGACG AGCTCATCCG TGGGCTTANG 
GTANGGGAGG CGAGNACCNN GGNCCAATAT NGACTCTAAC GTTCCACCGG 
NNCNTGTGGA NTACTTGGNC GAANNANNCN NNCCNNNNAN CANNCA

3 prime edge [+] show sequence

Chromosome: 4; Position: 68183 [Map]; Strand: w
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: 2704; Region: intergenic
- AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 1090; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTGG 
GTGTGTTGCT TGTGATGAAG GGTGCCTTGA GACGAGAGAA AAGAACATGT 
TTTCACCACT TTACTTACTT CACCCTCACG AAGTTAACAC ACACATATAT 
ATTATTCCAA CATACCTAAT ATTATATTAA TATATCATGA AACTTGAAAA 
TGTGTTGGTG TATTTGTATG TCATCCATTT TTTTTTTNTA ATTNAANGTT 
AAAATTTATT AAAAAAACGT NTTTNCAANT CAGTNCAANC NTTTTAAAAC 
AGNCNAAAAA NAAATNTTAT CTTCTNTNTN GGCTNGCAAN CCTANCTNGG 
ATGCCACTCG CNTNCTTNAA NGCTCCTCCA CTTTNGATCG NGCAAACCAA 
GCTN

AT4G00050.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00165.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR