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52-0213-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4121581 [Map]; Strand: c
      • AT1G12140.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 5
        Distance: 0; Region: exon1 (CDS)
      • AT1G12140.2 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0213-2 - 5-prime edge 
    TCTGTAACCC ATGCACTCTC GTGGGAGATT GGTTCGGAGA GAATCATAGA 
    CGCTTGAATG GACGATGGTT CGGTTTGGAT CGAGGCTAAG CGGGTCTGGT 
    TCGCTGTTAG GTGTGTATAC CCAGAGACCT CCGACTTTTG AGTCACGTTC 
    GAAAACGACG ACGGTGTGAT TCTCGCGGCG GAGCTCTCTT GCAGCTACGA 
    GTCCGGCGGC TCCGGCTCCG ATCACTGCCA CGTTGAGTGA GTTGACTCGG 
    GTTCGTGCTG GTGCCATCTT TTTTGTGTGA TGATGATGCT CTGTTCTCAA 
    AATTGGGTTT ATATAGGAAC GTCTTCGGTT CGGATTAACC GGTTCGGTCT 
    AAAAAAAATC AATTTTTTAG TCTTAATTAA GAAATGAAAT TAAAACCCAA 
    CTAAAAACGA GTGTTAGCAA TTTAATGACA TGGAGATACG CAACAAAGAG 
    AACAAAAAAG AACAGAAAAT GAAACATTAA CGTGTTGCAA CAATTATGCT 
    GTAATTGACT AAATCGAGAT CTTATTTGAG TGTTCATATA TTCTTTTTTG 
    ATAAAGAATA TTTATTTTAA ATAAAGTAGT GCTAATATAT TCTCCAAATA 
    CATAAAGGAT ATTACATAAG TCAAACTTTG CCAATCACCC TTAGATTGGA 
    ATTGGAACCA ACCGAAGACA TTTTCATTTT ATTTTTTGGA CTGCAAAAAA 
    GTTTTTTCAA CCTTTATTCA TTTNAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4121697 [Map]; Strand: c
      • AT1G12140.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 5
        Distance: 0; Region: exon1 (CDS)
      • AT1G12140.2 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0213-2 - 3-prime edge 
    GTTACAGAGA CTTCCCCTTC GGTGCCTCGA CCTGAAGATG ACGAATCAAG 
    AGACTCGAGA AGGTACCCTA GTCACAGAGA AGTTCTTGCT TACCTTGAAG 
    ACTTCGCTAG AGAATTCAAA CTTGTGGAGA TGGTTCGATT TAAGACCGAA 
    GTAGTTCTTG TCGAGCCTGA AGATAAGAAA TGGAGGGTTC AATCCAAAAA 
    TTCAGATGGG ATCTCCAAAG ATGAGATCTT TGATGCTGTT GTNGTTTGTA 
    ATGGACATTA TACAGAACCT AGAGTTGCTC ATGTTCCTGG TACTTCAATT 
    TCAGATGTTT TTTTAGATTG GATGATTTTG AAGTGAATAT GTTTTGATTG 
    ATGAGAAAAC TTGTTATTTT AGGTATAGAT TCATGGCCA

AT1G12140.1

Model type
Protein coding
Short Description
flavin-monooxygenase glucosinolate S-oxygenase 5
Curator Summary
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational Description
flavin-monooxygenase glucosinolate S-oxygenase 5 (FMO GS-OX5); FUNCTIONS IN: monooxygenase activity, 8-methylthiopropyl glucosinolate S-oxygenase activity, flavin-containing monooxygenase activity; INVOLVED IN: glucosinolate biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 3 (TAIR:AT1G62560.1); Has 12586 Blast hits to 12018 proteins in 1454 species: Archae - 35; Bacteria - 5986; Metazoa - 1231; Fungi - 1610; Plants - 812; Viruses - 0; Other Eukaryotes - 2912 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G12140.2

Model type
Protein coding
Short Description
flavin-monooxygenase glucosinolate S-oxygenase 5
Curator Summary
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational Description
flavin-monooxygenase glucosinolate S-oxygenase 5 (FMO GS-OX5); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 3 (TAIR:AT1G62560.1); Has 11380 Blast hits to 10828 proteins in 1431 species: Archae - 28; Bacteria - 5328; Metazoa - 1193; Fungi - 1290; Plants - 802; Viruses - 0; Other Eukaryotes - 2739 (source: NCBI BLink).
Link
InterPro Scan - TAIR