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52-0271-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7194720 [Map]; Strand: c
      • AT2G16586.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; H...
        Distance: 2782; Region: intergenic
      • AT2G16592.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -1456; Region: intergenic
    Flanking Genome Sequence: 52-0271-1 - 5-prime edge 
    GAAAGAATTA TAGGGTTCAT CTNTGCTTCT CCTCTNAAAG TTACNTTTAA 
    TATCTGTTTT TAAATAAATT AATCTAGTAA TTTACTAATT AATATCATA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7194836 [Map]; Strand: c
      • AT2G16586.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; H...
        Distance: 2898; Region: intergenic
      • AT2G16592.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -1340; Region: intergenic
    Flanking Genome Sequence: 52-0271-1 - 3-prime edge 
    ATTCTTTCTA TTATATAAGC TGCAACTTAT CAAAATAAAT CCATCTAACA 
    ATTACCTTTC GCTTCATGCG TACCAGTGTA CGGCCCCTAG TTTTGGAAAG 
    GACAGATCAT CGTATGTGTT GGTTCATTTC TCAAAGTATG GTATAAAGTA 
    TAAACTATCA CTATAAAGTA GGTCATCGTT AAGACTTAAG TCCCACTTGG 
    TCTGATTAAA TTCACATTAT TTATATATAC ACACATCTTT AGTATGTGGT 
    GTTTATAAAA TATGTGCTAA GCCATGTTAG CCAGATCACA TATGGATAAC 
    AGAATGATCC AAACAGCCCA CAAGTTTTGG GCTTATTACA TTATTGTTCT 
    TTAGAAATTT ATTTTATTTT ATTTTGCATT TCAAGATTTG CCCATCTTGA 
    AAATGTATAC GTATCACACC TTTTGATCAT AATGTAACTC TCGTTAATTT 
    GAAAAGGTAT CTTCTTTTGA ACTCAGGAGC ATTATCATAA ATAAAAACCC 
    CTCTTGTATT TGTTTTATTT CAAGCCACTT CGCTATAAAC TTCTGCCTCC 
    TCAATCTGAT AAAGTTACTC AAGATGGGTT TAATGCGATA TATTTACGTT 
    TCCAAACCGG AAGTCACAAT ATTCGTCAAC ACCAAATTTA GGCTTAGTTC 
    CAAAGGGACA TGTTACGACT TATGTAGGAG AACAAGAGGA GAGAAGAGAT 
    TTGTGGTCCA TTACAGAGAT AGTGAGTAGA ATCAAAACAA GATAT

AT2G16586.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G16592.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Curator Summary
Encodes a Protease inhibitor/seed storage/LTP family protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G16594.1); Has 38 Blast hits to 38 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR