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52-0371-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 127130 [Map]; Strand: w
      • AT4G00300.1 - [+] show detail - fringe-related protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0371-1 - 5-prime edge 
    ACGACGATAC CGTGTTTTTC ACGGAAAATC TTGTTAGGGT TTTGAGAAAG 
    TACGATCATA AACAGTTTTA TTACATCGGA GCTCCGTCCG AGAGTCATTT 
    GCAGAATCTT CATCAGTTTT CTTATGGAAT GGCGTACNGG TGGAGGAGGG 
    TTTGCTATAA GTTATCCATT AGCCAAGGTT TTGGAGAAGA TGCAAGATCG 
    GTGTATCGAG AGATACTCCG ATTTGTACGG ATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 127014 [Map]; Strand: w
      • AT4G00300.1 - [+] show detail - fringe-related protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0371-1 - 3-prime edge 
    ATCGTCGTCA CCCATCACAA CCCACCTCAC GTTTCTCTCC GGTTCCGTTC 
    CGTTTAACAT CCTCACCGTC TCGGACACGA TTCTCGTGAT CCTGATCGCT 
    GATCTGTGAC CGTTACGGTA ACGGTACTTG AAACTCGACG TGTCGGAAGA 
    GATTCTGATC TGAGGCAAAG CTGATGAAGA AGAAACGGTG TCGTTGATGG 
    GTTTGTCGAG CCAAACGGCG CCGTTCATGA CTCCGTTAGG TTTCCACCAT 
    GTTTTCACGT ATTCTCTACG ATGCTTCCAT AGATCTGAAG ACGCGGCGAT 
    TCCGAAGACT ATGTGTTTGA GCTCCGTTTG TTCCTCAGGT GTTTGACCCG 
    ACCCGAGACG GATAACGGGT ACGAGGAGAG AATTGGGGGA TTTAGAAGGT 
    GAATATGGGT TTAGAAAAGA GATGAAACTG AATGAGTATA AGAGATATGA 
    GACGAAGATC AAGAAGACGA CGATGGCCGT GAAGGAACAT GGAGATGAAG 
    AAGAAGAATA AAAGGGTTTA TTAGATTTGT CGTAAGAAAG TGTTTTTTGA 
    TCTTTGTGAT TGTTTTCTCC CATGGCTCTG ATTGACATAG ATGACGAAAT 
    TTTAGGGTTT TTCTCTGANG AGAAGAGACT AGTTTTTTTT TGTTTTGCTT 
    TGTGAGTTGT GACAGTGGTG GTGTTGGTGA NATTGAAGGC TTTTTATTAA 
    NAAATGAAAC CAAGTTTATT TTTTTTTAAT ACAATTATAA TCTGA

AT4G00300.1

Model type
Protein coding
Short Description
fringe-related protein
Computational Description
fringe-related protein; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G01570.1); Has 958 Blast hits to 946 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 87; Fungi - 151; Plants - 707; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR