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52-0378-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3245032 [Map]; Strand: c
      • AT5G10320.1 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: 0; Region: exon9 (CDS)
      • AT5G10320.2 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: 0; Region: exon9 (CDS)
      • AT5G10320.3 - [+] show detail - unknown protein; Has 51 Blast hits to 50 proteins in 17 species: Archae - 0; ...
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: 52-0378-1 - 5-prime edge 
    GTNAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACAT GAGAGCAATT CATTTGAAGT CCTTTGATTA 
    CAGGGTGTTG AATCTTCTAC TATACAAGTT GAGAGGAGAA GAGGTAGTAC 
    ACTCACGTGC CTTGTTTTAT TCACAATGTG AAGTCATATT CAATCCACCT 
    TCTAGTATGT GATACATATA GATTGTAATT GTATTGATAT ATGTCTTCTC 
    TTCTTTATTT GGAAAAGGTG AATGAGTTGC ATATGGACCT TCTTGTCAAT 
    CTCAGAGTTT CTGGTTGAAG TAGCGGATGA TCTGTAATCT TCTTTTAAAA 
    TCTCTCCATC TAACACAAAC AAACACAAAA AGTTTCAGAA TCTGAATGGT 
    TTCAACTTTA CTTGTGCAGG TTCGATTACG AGGTTAGATA CACCCTCAAA 
    GAACTCCCTA ACGTCATCAC GATCTTTCAA CTCGATATGG TTTTCTTGTA 
    GGATGATGTT CTTGAGAACA ATTTCAATGT ATTACGTATG TTTGTGGGAA 
    TATTCGGCTC ATCGAATGCA CCCACTGAAC TGGTAAAGAA ACATTAATAC 
    GACAGTCAAA TCAACGTTTC TCTGAAAATG TCTTAGAGCT CATTGGTTTT 
    TTTACAGGCG AAGCGGATAT CGGAAGCTGA AGAGAAGTAT GAAGAGATTA 
    TGAAATCCCT GGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3245029 [Map]; Strand: c
      • AT5G10320.1 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: 0; Region: exon9 (CDS)
      • AT5G10320.2 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: 0; Region: exon9 (CDS)
      • AT5G10320.3 - [+] show detail - unknown protein; Has 51 Blast hits to 50 proteins in 17 species: Archae - 0; ...
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: 52-0378-1 - 3-prime edge 
    TTTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AAGTCTCATC ACATCTTCGA GACAGATCTA TAAAGATACA GAGGAAACCA 
    TATGAGCAAA TGTAAAGCAA ATTCAAACAG ATAACAATAA ACTGAACCAG 
    TTACCTTGTT TTTGTTTGAA AGTGCATGAC AAAGCT

AT5G10320.1

Model type
Protein coding
Computational Description
unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10320.2

Model type
Protein coding
Computational Description
unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10320.3

Model type
Protein coding
Computational Description
unknown protein; Has 51 Blast hits to 50 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR