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52-0503-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18443588 [Map]; Strand: c
      • AT1G49820.1 - [+] show detail - S-methyl-5-thioribose kinase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0503-1 - 3-prime edge 
    NTTTNNCCGA CATTNTGTGT TTNNGTNNAN NTAAGANNAA NANNATNCGN 
    TCACANAAAN CACNCANNTG TGGTTTATNC AATAACTCCT GCTTGCTTCT 
    ATCCTGNNNN AGCGTGCTTC TCACTGANAC ATNGGACGNA CGTGANGCNA 
    NCTNCTGGTN TGTANTCACA NTGTNANANG CGAGACNCTC TNNTNTNGTG 
    TNTGTGATNG GAAAACCGNT GNGNAAACAT GNTANTNGNC ATGNACTGAN 
    ATTCAAGACC TNGCGGATCT ACGCTCCNNA NCATNANCNG CTTTCATTNN 
    CNNNCGTANN NCAATACTAN CNGNTAGTGA NAGNGTNANN GTGNNTNGAN 
    CAAACATAAC TCAGCTTTGC TTCGCGTGGC TGTNTNCCCN TGTNAGAGTN 
    TCCCATATNG AGNCNTCCAC ATTTAANCTG TTGGACTTTN ACCTTATCNA 
    GNTGATGATG CTAANGCTGT GCNCGAAGAC NGTGCCTTGA AGCTCNAAAT 
    CGCAGAGCTA AAATCGNNGT ATGNGNAGNC TCATTTTGCG GTGATTTGCG 
    ATAGGATTTG CTANTATNCT CTGAACCACC ATTGGGTATT ATGTTGGNAG 
    GTTTCTGTGA ANGAGCTCAA GCTTTGAGAA AGCAGGAAGT ANGGTTNGGT 
    TANTGGNTTN GGAGNCCGAA TATGGACTTG ATGTCATGTG TATNNATNGA 
    GGNNTAACAN CTTAAANCGC ACCCGNTNTT AAACCATAAN GGNCGGNNAT 
    NTTTNGGAAA ANAAANAAAN AT

AT1G49820.1

Model type
Protein coding
Short Description
S-methyl-5-thioribose kinase
Curator Summary
encodes 5-methylthioribose kinase, involved in methionine cycle
Computational Description
S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink).
Link
InterPro Scan - TAIR