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52-0523-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17167545 [Map]; Strand: c
      • AT2G41190.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon11 (3UTR)
    Flanking Genome Sequence: 52-0523-1 - 5-prime edge 
    CTGGATAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC AAAGAGACCC ATAGTTTATC CCCTGTACTT 
    TGAGTTGAAT GTTTTTGTTG AAGCTAATAA ACTCTTGATT ATGAAAGATT 
    ATTTTGGACT TGAAAGTTAA TAAAACTAGT GAAAGGTTTA CNTTTCTCAT 
    AGGTGTCACA TTTGCTTTTG TATTTTTGTG TATCTACTAT CTCTTCATTT 
    TTCTGAGCAT CTTTCTCATG TTTAGATTTG GGTATAATGA GCTCGCCTAT 
    TTGATAAAGG CATTAATAAT AAGTATTAAC AACACAAATA AACAAGGAGG 
    TGTTAACCTC AAAAGATAGA TATGTAAAAC AAAAAATTTA AAATTTGGTT 
    CTCATGATGT TCAAAAATCT GCTTTTTTGA GTGTCACAAT TTGATTATCG 
    GGTCACAACT ATTTAACACA GGAGGAAAAT AGACGACTAG TTAACAGTGA 
    AATTTACTCA ATTTATCGAA AATATAGGCA AACCCAACGG GAAAGAAGTT 
    AGAGGAAAAA AAAACAGTTT TTACAAGGTT AAGATTGACA TAATTCTGTT 
    GAACGATATT GTATTAATTA GTATCGGCCA TTTAGTGACC CAAATATCTC 
    CCGTCTCGTC ATCACCGACA TAACAAGGTG GAAGGAAAAT TACGAGACTT 
    GAGGTTTGNC GGTCCTGCTA AAGTGTTTTA ATGCTCCCTA AAACATTCTT 
    ATATACAATN GGTTTTTTAC TTTTTTTTTT TTAACCAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17167551 [Map]; Strand: c
      • AT2G41190.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon11 (3UTR)
    Flanking Genome Sequence: 52-0523-1 - 3-prime edge 
    AATTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    CCGGGAGTTC CTTCACTGAT AGTTCCTAAT GATCTTTGCC ACCGAAGAAT 
    ATGTCCCCAA GGTCCCGCTT ACCACCCCGA TGGCCACAAT GATCGAACTC 
    AGAATCATCT GTAGTACACA ACTCAGTGTT AATCTTAAGA ATCCAAATAC 
    AGAAACTCAT CATCCCATAA TAATTTCAAG AAATTGATAA CAGGACAACA 
    ACAAGGCTCA ATTTATATAC CTGTGTTCTT GTTGCTTTGT TCCCCATTAT 
    CTTTATGAAG CATAAAGCTG GCATTATTAT TGCCTGAACC ATACATACAT 
    TTATGTAAAA CTGTTTTGAG TGTCACATTT TTTGAAAACA ATAATGTTCT 
    TAAGATATTA AAGAGGATGA TGGAAACTAA CCACTAGTAT ACTGAGAAGA 
    GATCCTATAA GAGCCATCAT AAGACCTGTG TGGAAAATAA AACCAATTGC 
    AAAAAAAGAC CATTAAGGAG CAAATCTAGT AAAACGACAC ACGAGTGAGT 
    TCTCAACCTT TCTAGCTTAA TGTTCTTACC AAAAAATGGA ATAAGGAAAG 
    CAGAACAAAC AGAAGAAGCG ACGAGTGCTG TTCTTAGAAG AAGAAAGCAC 
    CATATGTTCT CTGACATTCT TTCCGGTAAT AGTTCTTCTA TACTCCTTGC 
    AAGTGGATTC ATCAGGAGAG CGTATTTTGT AAACGGACTC ACAACCTGAG 
    AAAGGAGAAA CAGAACCAGA TGAAGTTTTA GTG

AT2G41190.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G39130.1); Has 4993 Blast hits to 4959 proteins in 300 species: Archae - 18; Bacteria - 67; Metazoa - 1755; Fungi - 792; Plants - 1459; Viruses - 9; Other Eukaryotes - 893 (source: NCBI BLink).
Link
InterPro Scan - TAIR