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Mutant Lines
52-0605-1

52-0605-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 11892198 [Map]; Strand: w
- AT4G22580.1 - [+] show detail - Exostosin family protein
  Distance: -1473; Region: intergenic
- AT4G22590.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
  Distance: 1301; Region: intergenic

GTNAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCATT ATTGTTTTTT CCGTTTGCAC ATGACTTTTA 
AATTTTGATA TATCGTACTC TTATTTTTGT ATATATATAT ATATGCATAT 
ATATNNACTC CTTCATAAGT TCTATATATC AAACCTAGAT TTTAGAAATC 
AAAATTCAAT CCCATCAAAA ATAAATAAAC ACAGTAGTTT TTAATTGGAA 
CAACAAANTG TGAGCACAAA GTAGAACCAA GTTGATGAGC GACCTATNTA 
AATTNTGATA TATCCTACCT TTTCTTTATG CATATATNTA TTCTTTCATA 
AAATACATTT TTAAAAATTT AAATTCAACC TCAAAACCAA ATAGAAGTTT 
TTAATCAAAA CCAACAAACT GAACCGTGAA CACAAAGTAG AACCAAGTTG 
ATAGCTAGCT AATTGAGATG TACAATCTTA AGTATANTGT AAACAAAGAT 
TTTACTAATA ACTACACACT ATATACCGGT GTTATCTCCT GATATATTAT 
NTATGTCTTA TTTTATAACT CTCTTTAATC ATTCTTTACA CATATTTNTA 
TTTTTTTTTA TCTATCTAAC AATTTCTAAA GAACATNTGT GAGTGATCAA 
ATTAATTACA GCTTTATCAC ANACCAAAAT ANATTCACGC NAGACCAAGA 
AAACAGTATA CAAAGTTCTN TAGTGATAAA ACACANACTA NAAGATATTC 
TTACTACACT AATCNCTAAT CATTACAAAG ACTTAAN

3 prime edge [+] show sequence

Chromosome: 4; Position: 11892142 [Map]; Strand: w
- AT4G22580.1 - [+] show detail - Exostosin family protein
  Distance: -1417; Region: intergenic
- AT4G22590.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
  Distance: 1357; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
ACCTTCTTGT GCTACATCAT CCATTGCCAC CGAAGCTGTT GTATCCGTCA 
CCATCTTCTG GTTTCCTCCG TCCTAAGCAT AGTTGGACTT TATCCACTCA 
CCGGCGACCC CACTCACTAA AACCATATGT GCTTGACCTA ATCGATAATG 
TAGAGAGAGG ACCGACTACT GCATCTCCTG CTCGATCTCT TCCAATGTGT 
TAAGCAACGC CTCGGATGGA TCTTTCCACG ACCTAGTTTT AGTCCACGAA 
TGATCAAGAT C

AT4G22580.1

Model type: Protein coding
Short Description: Exostosin family protein
Computational Description: Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G13990.1); Has 709 Blast hits to 706 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 670; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G22590.1

Model type: Protein coding
Short Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G12430.1); Has 2353 Blast hits to 2348 proteins in 847 species: Archae - 42; Bacteria - 1327; Metazoa - 222; Fungi - 153; Plants - 482; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).
Link: InterPro Scan - TAIR