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52-0623-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22818335 [Map]; Strand: c
      • AT3G61670.1 - [+] show detail - Protein of unknown function (DUF3133)
        Distance: -254; Region: promoter
    Flanking Genome Sequence: 52-0623-1 - 5-prime edge 
    ACCACCACAA TGGTCCGTAT CTTCCTAACG GCGAAACTCT CAGTTCCGTC 
    TGCTTCTTCT TCTACGCCGT TATTAGTAGT GTTTATGCTG ATGTGTACTT 
    TTTCCATTTT CACACACTCT TTTTTGTTTT TTATTGTTGT AAAATACGAA 
    ATGGTTGGTT TTACTTTTTA TCTTTTTTCA GTATGCATTT TGAAACTTAT 
    TAGTGGATTA TGAAGAAAAT AAATAAGTTG GGGGAATTTT GCTTTTGCTT 
    TATTTATAAC AACCATATAC ATAATAGCTT TTCTTTATAG CTTCTATGTC 
    AGCGACCACT GAGGTAAAAA GAAAAGCAGG GTTTTGGCCT TTGTTAAAAG 
    ATGTGACAGA ATAAAGATTT ATAGCATTCA TCAATTACAC GAAATCAAAA 
    TGGCAGAGAA AATTAAAACA AAGTAAAGAA ATGAAATGGC AAACAAAAAT 
    ATAAAGAGAG AGAGGAAATA TTCGTAAATT AAAAGGTCAA AGACGACGAA 
    ACGTTAAATT AAAGTGGTCC ATGTGTATAC TTTGGTGGAG CCCAATGCCA 
    CACCAAACGA CCCAACCCAT TCGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22818401 [Map]; Strand: c
      • AT3G61670.1 - [+] show detail - Protein of unknown function (DUF3133)
        Distance: -188; Region: promoter
    Flanking Genome Sequence: 52-0623-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTG 
    GTGGTGGTTG CGTCACAGCT CAGAGAGGAA TAATGAAAAC AAATAACCAC 
    CAAGTAACTT ACAGTAAAAA CGCTCACTGT AAAAAACGCC GTCGTTTCAA 
    TAAATGTTGG TAGCTGCTAA AACGACGTCA TTTATTTTCT GAAAGAGAGA 
    GAGAGAGATG TTTTATACTA CTTCTTACTC TGTGCCGTGT GGAAAGGAGC 
    GAAATTTGCA GAAGAAACAA AGCATAACCC CCCAGAGAAA GAGAGAGAGT 
    TTCTCCCAAC AAGATCAAAC TTCGAACTCT ACGAGAACTA CTATTATCCA 
    AAACGCGAAA TAGAGAGACA GAGATTTCAT AAATTTCTTA CTTTTTAACC 
    CCAAAGTTCT TTTCCAGACA GCGTTTTCTT CTGTCTTTTG CTCTTTGTGG 
    TTTACTCCTT CTTCCGGTTT GGATTTCCCG AGCTAGTAAA GAAGGGATC

AT3G61670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3133)
Computational Description
Protein of unknown function (DUF3133); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT2G46380.1); Has 340 Blast hits to 282 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 17; Plants - 302; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR