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52-0657-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 255402 [Map]; Strand: w
      • AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0657-1 - 5-prime edge 
    CTTGTATGCA GACGATGAAG CCGACAATCA CTGCGTGTGA TATAGGAACT 
    TGGAAGTAAA GCGATGGAAG GACGATGGAG GCAAACTTTG CAGCACTAAT 
    GGTAAAGATA AGGAACCTCC AAAGATATGA TGTCGCGTAG ATTGAATGAA 
    AAGAAATCCA CTTTGTTACC AATCCCGATG ACGTAACACN GGCATAAGAA 
    CCGCATAACA GAAGCTACCG ATCTTGTCAG TGAGACCAGT ACCGAAAGGA 
    GGCGTCTTAG GAGTGACAAG ACCGAGAGCC ACGGATC

AT5G01680.1

Model type
Protein coding
Short Description
cation/H+ exchanger 26
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 26 (CHX26); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 27 (TAIR:AT5G01690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR