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52-0658-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 255329 [Map]; Strand: w
      • AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0658-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    GNNCTCTACG ATGTCCANAT CTNCAGACAG CTCTTNANCT ACANGGNACA 
    CATTGGGTTA NTACAAGATG AAATCTCATT CATCGCCNAT GAGTGTTTTG 
    ACTNTTAACG TACTNGNTTT AAGGGANGCA NAATATAAGC CNGGAGGCGA 
    TTNGGGATAA TGGCGATCTN TGCCATGGTT CACTCNACCA TTTNCACNGC 
    CNTNGNNNGA ANTCTCTACN GGTGGGTGCN NANGAAACAC ATGACTNACC 
    GGGNACAAAC CGTTGAACAC TACGAACCAN ACNAACCTNT CANGATCCTC 
    ACTTGTTTAT ACCACCGTGA AACCGGNCCT CCCATCCTCA CCGNCTTGGA 
    GCTNTCTACT TGTCCCTNGA GCGCCTCTTN NNTCTCCATC GTTNNCGTTA 
    ATCTTGAAGA GCNTGAGCAA AATAACGTNC CTCTNCTCAT TCAACACCAT 
    CCAGGNCACA ACGACGAGTC ATCAACGTCT TCCAGCCGCN GAGATCANAT 
    CTNCAAAGCC TTCGAGAAAT TCCNAAGCGG CCACNATTTG CAAGANAACG 
    TTTNCGTTGA ATGTTTCNCA GCAGTTGCAC CGAGCAAGAC GATGCACGAT 
    GATGTATGTG CCTTGGNCTT CGAANAAGAN ACCGATCTCA TCATTGTNGG 
    GATGGCCGAC GGGACTGCAG CAGAACGAAG GCTCTGTCGC AACGTGCGGA 
    ATGCCTCACC TAGCTCCGTT GCGGNTCTAA TGGACCAAG

AT5G01680.1

Model type
Protein coding
Short Description
cation/H+ exchanger 26
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 26 (CHX26); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 27 (TAIR:AT5G01690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR