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Mutant Lines
52-0699-1

52-0699-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 18060340 [Map]; Strand: w
- AT4G38630.1 - [+] show detail - regulatory particle non-ATPase 10
  Distance: -800; Region: promoter
- AT4G38640.1 - [+] show detail - Plasma-membrane choline transporter family protein
  Distance: 0; Region: exon2 (CDS)

ATTCCGGTTA GGATTCTGGT GGAAACCGTT TCGACAAATA CAGCTGACAG 
TAGGTTGCGT CTTAACAGCT CGTAAGTCAT TTTCGCAGAG GTGCAATACG 
CTTCCCCTGT TATTGCAGCA AAGTTGATGG TGAACTTGTT GAGATAGTCA 
AGGGCACCAA GTAAGGCGTT TGCACAGCAA CGGAGAACCA TGTTCACTAT 
TCCTTGTGTG TTCTCTTCTC TTGCATTGTC CACAATTGCC CGGACCACAC 
GAACAATGCA TATGAGAAGT CCTGATACAC ATATCGTACC AAAGGATTGA 
CCAAATGCAT TCCTGAAGAG ACAGATACAA AAAATAATAA GATTCACACA 
TGCTTTGACA TAAACCAACA ACAGATTTGA AGACTAGTGC AAATTTGGAT 
C

3 prime edge [+] show sequence

Chromosome: 4; Position: 18060224 [Map]; Strand: w
- AT4G38630.1 - [+] show detail - regulatory particle non-ATPase 10
  Distance: -684; Region: promoter
- AT4G38640.1 - [+] show detail - Plasma-membrane choline transporter family protein
  Distance: 0; Region: intron2 (CDS)

ACCGGAATAG TCTTTGTCCT GTCAGCCGCA TATGCAGTCG CGGTAAGTAT 
TATCTTCTGC TTGTCTCACC AACCAAGCAT TTAATAATTG CCATAATGAC 
TAATTCCGGG GTTTGATGAT GCGCAAAAGC AGACATGGGC NTGTTCTGAG 
AGGAGTGAGC AACCTGGGTA TAGATTCGTA CGTGGTGGCT GTACTGGCGT 
GGGTGTTACN TGATTGTGAT ATTGGCTTTC TTTGTACATG TTCTTGACGA 
TGTGATTGAC ACAATCTATG TCTGTTACGC GATTGATAGA GACAAAGGGG 
ATGTATGTAA GCAGGAAGTT CACGAGGTTT ATGTTCACTT GCCTATCAGC 
AGAAGCACAA GATCTTCTCT CATTCCAAAT GCTCTTAATG CATAGCAGAA 
GATGATCCAA CGTCTCTGCT TGTTGTATCT TTTTTTGTTT GTTAGCACCG 
TTGTAAATTC CTCTCTGGTG AACTGTGGTT TGTCTTCTTG GAGGTTTATA 
TTGATGTTTT GTAGAGTTAT GGGGTAACAA TGTTGAATAA AAGAAAGACT 
TTAGTTATAG GAATTACTGT AATGTGGTCT GTGTTTCTTT TATTCATTAA 
TAAATCAACT TTGTTTTGCT TTTTATCAAA AACAACCATT GGGGCTAAAT 
TGAAATAAAC GTAAAATATT AGGGTCTAAA GGANAAAGTA AAAAGTAACN 
GGGATATTTA AAGAAGAACA ATGTTATTAT TATCG

AT4G38630.1

Model type: Protein coding
Short Description: regulatory particle non-ATPase 10
Curator Summary: Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities
Computational Description: regulatory particle non-ATPase 10 (RPN10); FUNCTIONS IN: peptide receptor activity; INVOLVED IN: in 19 processes; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ssl1-like (InterPro:IPR007198), Ubiquitin interacting motif (InterPro:IPR003903), von Willebrand factor, type A (InterPro:IPR002035); Has 677 Blast hits to 665 proteins in 240 species: Archae - 0; Bacteria - 16; Metazoa - 271; Fungi - 148; Plants - 120; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38640.1

Model type: Protein coding
Short Description: Plasma-membrane choline transporter family protein
Computational Description: Plasma-membrane choline transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR