1. Home
  2. Mutant Lines
  3. 52-0736-1

52-0736-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11032639 [Map]; Strand: w
      • AT4G20460.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT4G20470.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0736-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    AGTGGTGACC AGGTCTCGTA GTTGTGGTTT CGTTTTGCAT TGCACGTTTC 
    TTCTTCTTTC TTCGCTCCTC ACTTTCTTCT TCTTCCTCCG CTTCTCCTCT 
    ATTTTCTCTC TCTCTCTCTC TCTTTTTCTC TTTCTCCCAA AAGTCTCTCT 
    TACGTTCTTC TCTCTCCCTT AATAACGTCG CGTCTTTCTC CATTTCAACC 
    ATCACACAAC TCTTCTTCTT CCTCCTCTCT CTCAATTCGT GTTTTCCCAA 
    ATTCTCAGGT ACTCTCTCTT ATNTATGTCT TGTCTCTTCC TATNNACCCA 
    ATNCATTAAC CTGATTNTGT TCTGTTTCTG CATTNNGCCC CACTTTNGAA 
    ACGAATT

AT4G20460.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity; INVOLVED IN: galactose metabolic process, cellular metabolic process, nucleotide-sugar metabolic process, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G30620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G20470.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR